Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00015 ATGGCAAAATATGGGGAAGAGCCATGTAGTTTTACCTATGATGTTTTCCTCAGTTTTAGAGGTGAAGATACAAGGCACATATTTATAGCACCTCTTCGTAGAGAGTTGCGCCTTAAGGGAATTAGCACTTTTGTTGATGATGAGAATCTGAGGATAGGGGAAGGTATTTCACCTTCCCTTCGCAAAGCCATTGAAGAATCTAGGATTCTAATCATTGTGTTATCTGAAAATTATGCATCTTCGAGATGGTGCCTTGATGAACTTGTCGAGATCGTAAACTGTATCAAGAGGAACAACAAACAACTTGTTTTCCCAATTTTTTACCATGTAGATCCTACAGATGTAAGGCATCAGAAAAATCATTACAGGGAAGCCATGAACGCACACGAGGATAGGTTTGGCAAAGACTCAGAGAAAGTGCAGGCATGGAGATCTGCTTTGACTGAAGTAGCTAACTTAAAAGGGCACCATATTAGTGACGGGTATGTGCCTAAACCTTTACATATTGATCAGAACCCAGTTGGACTTGAGTCACGCACAGAAGCGGTGAAGTTACTTTTAGACATGAAGCCTCATGATGACACTGTATGCATGTTGGGCATATATGGAGCTGGAGGAATAGGGAAAACAGCACTTGCACGAACTTTGTATAACAAGATTGCCCACGAATTCGAAGCCGCAAGTTTTCTTGCCAATGTTAGAGAGAAATCAAACAAAATCAATGGTATTGAAGATCTGCAGAAAACACTTTTATCAGAGATGTTGGTGGAGTTGGAAACGGAGTTGGGCAGTACAAGTGAAGGAATCTCTGAAATAAAACTCAAGCTTCAGGGGAAGAATGTTCTTTTGGTTCTTGATGATGTTGATGACAAAGAAATGTTAGAAAAATTAGCAGGAGGATGTGATTGGTTTGGTTCAGGTAGCAGGGTCATTATAACAACAAGGGACAAAGATTTGCTAATTGCTCATCAAGTTGAAAAGAAATATGAAATGACAGAACTTGATGATCAGCATTCCCTTCAGCTCTTTTGTTTGAATGCCTTCAAAAGGAGCTATCCTCCAACAGGTTTTGAAGATTTATCTTCTCGTGCAGTTGGTTATGCACAGGGTCTTCCATTGGCCTTAAAAGTAATAGGCTCTGATTTGGCTATGGCACAAAGTTTAGATGCTTGGGAAAGTGCATTGAAAGAATACGAGAGGATTCCAAAAAAGAGCATTCAAAACGTGCTCAAAATAAGCTTTGATAGATTGGAGGAAAATGCTCAGCGGGTTTTCCTTGACATCGCTTGCTTCTTCAAAGGGGAGAGAAAAGAGTCTGTTGAAAAGATACTTGAGGATCAATCTGTCACTGAAATGCCTGATGTGTCCGAGGTTCAAAATTTAATTGAACTGAGACTTGATAATTGTAAGAACCTAATTGCGGTTCATGAATCTGTTGGATTTCTCAAAAATCTTCTTCACTTAAGCGTTTCGGAATGCACCAAACTCAGAAATTTCCTGCAAAGAATGTTTCTACCATCTCTGGAAGTCCTTGATCTTAATTTATGCGTAAGCCTTGAACACTTCCCAGATGTAGTAGAAAAGATGACAAAGCCATTGGAGATTTACATGATAAATACTGCTATTAAGGAACTGCCACATTCTATTGGTAATCTTATCGGGCTTGTTTGTATAGAGATGCCAAGTAGCAGGAAACTCAGATATCTACCAAGTAGCTTATTCATGTTGCCAAATGTTGTTGCCTTTAAAATGGGAGGATGTTCTCAACTTCGAGAATCCTTCACAAGGTTCATAGAGGGTCCTTCAGCAGCAGAAGGTTGTTCACCATTACAAAGATTGTATTTCGACAATGGTGGTTTGTCAGATGAAGATCTTCATGCAGTTCTCAAATGTTTTCCAAAACTAGAAGAGTTGATTGCATCAGAAAACAATTTTGTATCTCTTCCTGCTTGCATTAAAGAATCTGTTCACTTGACAAGTCTCGATGTGAGTGTTTGCAAGAATCTTAAAAGAATTCCTGAATGCACTGACTTGAGAATTCTTAATGTCCATCGCTGTGTGAAGCTTGAGGACATTTCAGATTTGCCATCTACTATTCAGAAAGTAGATGCAAGATACTGCTTCTCCTTAACTAGAGAGACGTCAACCATGTTATGGTCTCAGGTGTCAAAAGAGATACGTGGATTAGAAGATGTGAATGAAATGGCAAAACAATCTCGTACGCAACTTGTTGAGCTCCACTTGTTTATCAATGGTCGATGTGTGCCTCGCAAAGGCTATTACAACTTCAGAATTGCAGCAGATCATGTGTTACTTTGTGATCTGAGACTTTTGTTCAGCGATGAGGAGTGGCATGGTCTTGATGCATTTCTTGAGCATGATTGGAACATAGTGCAGGTTTCGTATGCAGCCACCTTAGCACTAAGTTGTTGGGGAGTTTATGTGTACAAACAAGGAACCGAAGTCGATGATGTCCAATTCATGTGTCCTGATCCCGAGTACTCAGATATAGCTAACATATCACGGACAATAATTCCTACAAGGGATTCTAAGATGGAAAAAATGAAGATGATAGAGAGCTCAGGTCTAGAAAGAATGTTTGATCGAATGTTGATTGAAACCATGAACTACGAAGAACGAGAGGGTTTTGCAGATAAAGATTTTTCTATGGAGGCACATCAAGTTCTAATGGGAGGTTTGAAGAAGATATCGAGTCAGGCTAAGGATTTATTAGAATCCAATGGAAAAGGATCAGCTCTAGAAGGTAAAAAATCCACCCTTGAATGGTTGCTAGACACTATTAATAAAGGTGATGAGGTAGATGGGCCTGGAGTCTTTTTTCATGAGGATCTTGCAGTGATGCGTCTAAAGGGTGATGAATTGAAGCCTTCTATGGGAAGCGGCAGCGGTCCCCATCAACTAGATATGGGAAGATTTTTGGAAGGAATGTCGAAGCGTCGTATGGATGAAGGAGAAGCTTCAATCTCTCGCCATCAGGGAAGTGGCCGCGATCCCCAACAACTAGATATGGGAAGATTTTTTGTTGATATGTTTAATTCTCCTATAAATATAGGAGAAGCTTTAAGCCCTGGACATCAGGGAAGTGGCAGCGATCCCCAACAAGAACAAATATTGATGGGAATATTTTGGGATGGAATGGAGGATGGACTTCTTGAAGCACAGAATAGCTTTCCTTCTCTAGATATAGAGACAACCAGATGTGCTGCCTTAAACAAGGGTAATAGGGTTGCATGGTCACTGCCAGAGTCAGGGGTACTAGTACTACCCCAAGTAGAAGAGAAGACATACATAGAAGGAATCTTTAATGGACTCATGGAAGCAAAGCAAAGCTTTCCTACTCTTGATATAGAGGCAACACTAAATACCGTGTTAAGTAGGGCGATCCTTAAAGTACCTACTGAAGCACCACCTGTGATTCCACAAGTATTGGATTCGACTACAGTGATGGTTCCTTGCTCTGACGATCCTTTGTTGCAAGCATTCATGATGATGAAGCCGGAAAGTTGTGAATCTGAGGCCAAGAGTAAACTATATTGCAAGTTGAAGGAGGAACACAAAGCACTGCGCCAGAGATTTGAAGAATTTGAAAATGAAAGCGTTGATCAGAATAAAGATACTGATGCAGCCAGCTATTGGAAAAATCAATATGATGAATTGCTTGAGAAATTCAACACTCAATCTGCTGAGCTTATTTCAAAGAAGAATCACAACCTTGATGGTACTGATGATGCCGAAGCGAAGGCAACAAATATTTCTGACTCAAATTCTGCTTTGATTAGCACAGAGATGCACACAGCCATTGGAATAGGAGGCTGCAAAGGTGTTGCAAAGTATGAGAAGCTGGCTGCTGTTTTGAAGGGAAGGGATGAAGAGTTACGGAGGCTTTATGATGCTGGCATTGAAGGCTTCCATAACTCGGAAGAGTTTCAAGATCTGATGAGTGCTATATACTTGAATGGACTTAGGGATGGTATCCTTGAAGCACAGGCGATCTCACTTGCTCTGGACATGGAGAGAATGATTCCAGTGTTTAAGGAGAATGAGAAACATGCAACTGATGAGGAGGAGGCTGCTAAAGAGGAACATGTTACTGATGAGGAGGCTGCCAATGAGAAACGTGCAACTGATGATGAGGCTGCCCAAGAGGAACATGTTACTGATGAAGTTGCCAAGGAGAAACATATTGAGACTGCTGATAATGAAAATCTTGATGAAACAATTGGTGCAGCAGATATTCCAGGTCCTACTGATCCAGAAGTTTACAACTCTCCTGAGACTTCAAACCCCTCCAGCTCATAG 4320 0.4076 MAKYGEEPCSFTYDVFLSFRGEDTRHIFIAPLRRELRLKGISTFVDDENLRIGEGISPSLRKAIEESRILIIVLSENYASSRWCLDELVEIVNCIKRNNKQLVFPIFYHVDPTDVRHQKNHYREAMNAHEDRFGKDSEKVQAWRSALTEVANLKGHHISDGYVPKPLHIDQNPVGLESRTEAVKLLLDMKPHDDTVCMLGIYGAGGIGKTALARTLYNKIAHEFEAASFLANVREKSNKINGIEDLQKTLLSEMLVELETELGSTSEGISEIKLKLQGKNVLLVLDDVDDKEMLEKLAGGCDWFGSGSRVIITTRDKDLLIAHQVEKKYEMTELDDQHSLQLFCLNAFKRSYPPTGFEDLSSRAVGYAQGLPLALKVIGSDLAMAQSLDAWESALKEYERIPKKSIQNVLKISFDRLEENAQRVFLDIACFFKGERKESVEKILEDQSVTEMPDVSEVQNLIELRLDNCKNLIAVHESVGFLKNLLHLSVSECTKLRNFLQRMFLPSLEVLDLNLCVSLEHFPDVVEKMTKPLEIYMINTAIKELPHSIGNLIGLVCIEMPSSRKLRYLPSSLFMLPNVVAFKMGGCSQLRESFTRFIEGPSAAEGCSPLQRLYFDNGGLSDEDLHAVLKCFPKLEELIASENNFVSLPACIKESVHLTSLDVSVCKNLKRIPECTDLRILNVHRCVKLEDISDLPSTIQKVDARYCFSLTRETSTMLWSQVSKEIRGLEDVNEMAKQSRTQLVELHLFINGRCVPRKGYYNFRIAADHVLLCDLRLLFSDEEWHGLDAFLEHDWNIVQVSYAATLALSCWGVYVYKQGTEVDDVQFMCPDPEYSDIANISRTIIPTRDSKMEKMKMIESSGLERMFDRMLIETMNYEEREGFADKDFSMEAHQVLMGGLKKISSQAKDLLESNGKGSALEGKKSTLEWLLDTINKGDEVDGPGVFFHEDLAVMRLKGDELKPSMGSGSGPHQLDMGRFLEGMSKRRMDEGEASISRHQGSGRDPQQLDMGRFFVDMFNSPINIGEALSPGHQGSGSDPQQEQILMGIFWDGMEDGLLEAQNSFPSLDIETTRCAALNKGNRVAWSLPESGVLVLPQVEEKTYIEGIFNGLMEAKQSFPTLDIEATLNTVLSRAILKVPTEAPPVIPQVLDSTTVMVPCSDDPLLQAFMMMKPESCESEAKSKLYCKLKEEHKALRQRFEEFENESVDQNKDTDAASYWKNQYDELLEKFNTQSAELISKKNHNLDGTDDAEAKATNISDSNSALISTEMHTAIGIGGCKGVAKYEKLAAVLKGRDEELRRLYDAGIEGFHNSEEFQDLMSAIYLNGLRDGILEAQAISLALDMERMIPVFKENEKHATDEEEAAKEEHVTDEEAANEKRATDDEAAQEEHVTDEVAKEKHIETADNENLDETIGAADIPGPTDPEVYNSPETSNPSSS 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00015 1439 Pfam NB-ARC domain 182 410 IPR002182 GO:0043531
Gabi4184g00015 1439 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Gabi4184g00015 1439 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 444 IPR044974 GO:0006952
Gabi4184g00015 1439 MobiDBLite consensus disorder prediction 1356 1439 - -
Gabi4184g00015 1439 Gene3D - 333 418 IPR042197 -
Gabi4184g00015 1439 Gene3D Ribonuclease Inhibitor 536 751 IPR032675 -
Gabi4184g00015 1439 MobiDBLite consensus disorder prediction 987 1007 - -
Gabi4184g00015 1439 PRINTS Disease resistance protein signature 198 213 - -
Gabi4184g00015 1439 PRINTS Disease resistance protein signature 275 289 - -
Gabi4184g00015 1439 PRINTS Disease resistance protein signature 368 382 - -
Gabi4184g00015 1439 PRINTS Disease resistance protein signature 503 519 - -
Gabi4184g00015 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 428 IPR027417 -
Gabi4184g00015 1439 ProSiteProfiles TIR domain profile. 11 187 IPR000157 GO:0007165
Gabi4184g00015 1439 Gene3D - 9 167 IPR035897 -
Gabi4184g00015 1439 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 165 - -
Gabi4184g00015 1439 Pfam TIR domain 13 151 IPR000157 GO:0007165
Gabi4184g00015 1439 SMART till_3 12 153 IPR000157 GO:0007165
Gabi4184g00015 1439 MobiDBLite consensus disorder prediction 1356 1408 - -
Gabi4184g00015 1439 Gene3D - 168 331 IPR027417 -
Gabi4184g00015 1439 SUPERFAMILY L domain-like 446 694 - -
Gabi4184g00015 1439 Coils Coil 1192 1212 - -
Gabi4184g00015 1439 Gene3D Ribonuclease Inhibitor 441 535 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00015 Gabi-Chr4184 91137 108359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00015 13 702 WRKY Transcription Factor Family AT4G12020 24.291 1.15e-36 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00015 - - vvo:131615864 598.971