Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00013 ATGGAGGAAAATCATTCACACGTTATAAGAAGCTTTCCAAAGTTTGAGATACTCAAGCGTTACAAACAAATGGATGTGGCCAAGTTACATAACTCTGATGACAAGAAAGAAGATGAAGTAGTACTTCCTGGTTTTAGATTCCATCCAACAGATGAAGAACTTGTTGGGTTCTATCTGCGGCGAAAGGTGGAGAAGAAGCCTCTTCGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCGTGGGATCTTCCAAAAGAGAGTTCTGTGGGGGAGAAAGAATGGTATTTCTTCTGCATAAGAGGGAGAAAATACAGGAACAGCATAAGGCCTAACAGGGTAACAGGGTCTGGATTCTGGAAAGCCACAGGGATTGACAAGCCTATATACAGTGTTAAAGAAACCCATGAATGCATTGGCCTCAAGAAATCATTGGTTTACTACCGCGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCACCCAACGGAAAAACTAGCAATAATCCACAACCTAATGCTAGCAATGATGTTCAACAAGCTGAAGTGTGGACGCTATGCAGAATATTCAAACGAATCCCATCTTACAAGAAGTACACACCAAATTTGAAAGACTCGGAACCAGTCACCAAGCCAAACCCCACTAATTCTTCAACTTCCAAAACATGTAGCTTAGAATCTGACAACAGCAAGTCGTACTTGACTTTCACAGACTCTGCAGTCATTCACCAAATTGAAAGGAAACCTGTTATTGGACAAGTTGACGAAAGGAACAACCACTTATTTCAAGGTCAGTTAGGCAATGTAGCTGCTCAGCCTCCAACAACGTTGTCTTACTCAAGTTTTAATTGGAATCAGAATGTGAATGATGATGCATTTGCAAATGAGAACTGGGATGATCTCAGATCTGTCGTTCAGTTTGCTAATATTGATCCATCCAAGGTTTATGATTGTAAAGAATTAAATAGATTTTAA 1002 0.4042 MEENHSHVIRSFPKFEILKRYKQMDVAKLHNSDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKESSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKETHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKTSNNPQPNASNDVQQAEVWTLCRIFKRIPSYKKYTPNLKDSEPVTKPNPTNSSTSKTCSLESDNSKSYLTFTDSAVIHQIERKPVIGQVDERNNHLFQGQLGNVAAQPPTTLSYSSFNWNQNVNDDAFANENWDDLRSVVQFANIDPSKVYDCKELNRF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00013 333 FunFam NAC domain-containing protein 35 50 204 - -
Gabi4184g00013 333 MobiDBLite consensus disorder prediction 210 235 - -
Gabi4184g00013 333 ProSiteProfiles NAC domain profile. 41 201 IPR003441 GO:0003677|GO:0006355
Gabi4184g00013 333 Pfam No apical meristem (NAM) protein 43 169 IPR003441 GO:0003677|GO:0006355
Gabi4184g00013 333 SUPERFAMILY NAC domain 39 200 IPR036093 GO:0003677|GO:0006355
Gabi4184g00013 333 Gene3D NAC domain 50 204 IPR036093 GO:0003677|GO:0006355
Gabi4184g00013 333 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 38 248 - -
Gabi4184g00013 333 MobiDBLite consensus disorder prediction 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00013 Gabi-Chr4184 62408 66136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00013 35 201 NAC Transcription Factor Family AT5G39820 62.570 1.53e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4184g00013 NAM 1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00013 - - gmx:100784323 506.138