Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00010 ATGGAGGAAAATCATTCACACGTTATAAGAAGCTTTCCAAAGTTTGAGATACTCAAGCGTTACAAACAAATGGATGTGGCCAAGTTACATAACTCTGATGACAAGAAAGAAGATGAAGTAGTACTTCCTGGTTTTAGATTCCATCCAACAGATGAAGAACTTGTTGGGTTCTATCTGCGGCGAAAGGTGGAGAAGAAGCCTCTTCGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCGTGGGATCTTCCAAAGAGTTCTGTGGGGGAGAAAGAATGGTATTTCTTCTGCATAAGAGGGAGAAAATACAGGAACAGCATAAGGCCTAACAGGGTAACAGGGTCTGGATTCTGGAAAGCCACAGGGATTGACAAGCCTATATACAGTGTTAAAGAAACCCATGAATGCATTGGCCTCAAGAAATCATTGGTTTACTACCGCGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCACCCAACGGAAAAACTAGCAATAATCCACAACCTAATGCTAGCAATGATGTTCAACAAGCTTGTCTTTGTTTCTATGCCCTTTATGGGGGGGTTTGCACTTTGCAGGAAGTGTGGACGCTATGCAGAATATTCAAACGAATCCCATCTTACAAGAAGTACACACCAAATTTGAAAGACTCGGAACCAGTCACCAAGCCAAACCCCACTAATTCTTCAACTTCCAAAACATGTAGCTTAGAATCTGACAACAGCAAGTCGTACTTGACTTTCACAGACTCTGCAGTCATTCACCAAATTGAAAGGAAACCTGTTATTGGACAAGTTGACGAAAGGAACAACCACTTATTTCAAGGTCAGTTAGGCAATGTAGCTGCTCAGCCTCCAACAACGTTGTCTTACTCAAGTTTTAATTGGAATCAGAATGTGAATGATGATGCATTTGCAAATGAGAACTGGGATGATCTCAGATCTGTCGTTCAGTTTGCTAATATTGATCCATCCAAGGTTTATGATTGTAAAGAATTAAATAGATTTTAA 1044 0.4071 MEENHSHVIRSFPKFEILKRYKQMDVAKLHNSDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKETHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKTSNNPQPNASNDVQQACLCFYALYGGVCTLQEVWTLCRIFKRIPSYKKYTPNLKDSEPVTKPNPTNSSTSKTCSLESDNSKSYLTFTDSAVIHQIERKPVIGQVDERNNHLFQGQLGNVAAQPPTTLSYSSFNWNQNVNDDAFANENWDDLRSVVQFANIDPSKVYDCKELNRF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00010 347 SUPERFAMILY NAC domain 39 214 IPR036093 GO:0003677|GO:0006355
Gabi4184g00010 347 ProSiteProfiles NAC domain profile. 41 215 IPR003441 GO:0003677|GO:0006355
Gabi4184g00010 347 Gene3D NAC domain 50 218 IPR036093 GO:0003677|GO:0006355
Gabi4184g00010 347 Pfam No apical meristem (NAM) protein 43 168 IPR003441 GO:0003677|GO:0006355
Gabi4184g00010 347 MobiDBLite consensus disorder prediction 224 249 - -
Gabi4184g00010 347 FunFam NAC domain-containing protein 35 50 218 - -
Gabi4184g00010 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 38 262 - -
Gabi4184g00010 347 MobiDBLite consensus disorder prediction 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00010 Gabi-Chr4184 62408 66139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00010 35 215 NAC Transcription Factor Family AT5G39820 61.538 6.43e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4184g00010 NAM 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00010 - - gmx:100784323 492.271