Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00088 ATGCCGGACTTTCACGATTCCCTCACGCCGCCGTCACGCCCTGTCCCTGTCCGCGAGGATTGCTGGTCTGAGGAAGCCTCTTCTACCCTCGTCGACGCCTGGGGCCGCCGTTACCTGGAACTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGATGTCGCCGACGCCGTTAATGCCCTCCACGGCCTTACGAAGAAAACCCACCGCACCGACGTCCAGTGTAAGAACCGCATCGACACCATCAAGAAGAAATATAAGATCGAGAAGGCTAGGGTTTCGTCTTCCAATGGTATTCTTTCTTCCTCTTGGCCTTTCTTCGAACGATTAGATGCTCTGATTGGCCCCAATTTCAGTGCCAAAAAATCATCCTCTTCACCCTCGCCGTCGCCTCCCGTCGCTCTCCCCTTGTTGCCTCAACGGAAAACCCCTTATTCCCCTGCGATTGCTGTGCCGCCGATGGCCGTGGTGCTGCCGCAGAAGCGGCCTGCGGCGATGACGATGGATGATGGTTACTTTAGGAGGAATTATTCTGCGATGGCCGCTGCCGCGGCAGCTGCGGAGGATGATGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAGCAGAGGAGGAGGAGGAGGATGAAGATGAAGATGAAGGGAGGGGAAGTGAAGTAGAGGAAGGGGAGAAAGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAAAGAGTGGAGGGACAGAAACTGAGGCAGATGGTTGACTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAAGTTCAGCTGGAGAGAATTAAGCGCGGGAAAAGATCTGGGTCTAATGATATGTATAGCTAG 906 0.5442 MPDFHDSLTPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGLTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGILSSSWPFFERLDALIGPNFSAKKSSSSPSPSPPVALPLLPQRKTPYSPAIAVPPMAVVLPQKRPAAMTMDDGYFRRNYSAMAAAAAAAEDDEEEEEEEEEEEEEAEEEEEDEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00088 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Gabi4183g00088 301 FunFam trihelix transcription factor ASIL2 22 88 - -
Gabi4183g00088 301 MobiDBLite consensus disorder prediction 181 231 - -
Gabi4183g00088 301 Gene3D - 22 88 - -
Gabi4183g00088 301 Coils Coil 177 217 - -
Gabi4183g00088 301 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Gabi4183g00088 301 MobiDBLite consensus disorder prediction 119 139 - -
Gabi4183g00088 301 MobiDBLite consensus disorder prediction 186 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00088 Gabi-Chr4183 710417 716942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00088 18 300 Trihelix Transcription Factor Family AT3G14180 32.402 8.36e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi4183g00088 Myb_DNA-bind_4 5.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00088 - - gmx:100815241 443.351