Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00081 ATGTCACAAGGAAATGAGCTTCATAATAATGAGAGGAGTGGCAGGAGTAGTGAGGACCAAGTTGAGGAAACATCATCAGGATCTTCACAGAAATGTTCTTCCTTTGACTTGAATGAAGAAGCTAGCAGTGAAGATAACAATGAAGCCTGTGAACTCACAATGGAATTAGAGAATGAGAAAGCAAAGGATGAGGGCACTTCAGCAAATAGAAGTAGTTCATCAACAGAAGGAAATGAGAGAAAAGGTGCAGTTAGGCAATATGTTAGATCCAAAATGCCTCGGCTTCGATGGACTCCTGAGCTTCATCTTTCCTTTGTGCATGCTGTTGAAAGGCTTGGTGGTCAAGAGAGAGCAACACCAAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTAAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAGGCCGGGCAAGTACTAAGTCAAACATACAGATCATCGACCCAAGAAGTAGTTCGTAGATCTCAAATATTCAATCAGTCCATGAATCCTCATCAACATTTCAAGATGGGAAATGGTGGAATTATCCTAGCAAGTAGTTGCAACGAGCAAAGTCATTTCCAAAGTCTCCTACGGCCTTCTTTCTCCCTATCACGTTCACATACAAACGCCACCGACTCAAGGCACCAGCATTGGTACTTGAATCATCAACCTTTAAGAATACCAATAGCTTCAAACCAAATTCAACGAATGGATACATCAGGCAAAATTGCACCCATGCGACCAAGCCAATTTCTTGAAGAGAAAAGGTGGCCTCCATTAGAAATTATGAACAATCATCAATCCAATAAGTTCAAAACAACACCTGCCAATGTTATTGTTGGGTCACAGGCTGTTGAACGAAGCACTGGGAACAACACAAGTATCAGAGAATATCTATCACATCCCAATGATATTGTAAAGCTAGCATTTGATCCCCCATTTCGGATTAAGTTGAATGAAGAGAAACTGCAGAAAGACAAGCAAGACTTGCCTCATTTGCAACTTGGTTTGAGTCACACAGATGGAACGGGTGATGGCAAGATTGAACATTGCAGAGAAACCCAAGAAATTAGCACTAAGCTTTCACTTTCTTAG 1125 0.4151 MSQGNELHNNERSGRSSEDQVEETSSGSSQKCSSFDLNEEASSEDNNEACELTMELENEKAKDEGTSANRSSSSTEGNERKGAVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSQTYRSSTQEVVRRSQIFNQSMNPHQHFKMGNGGIILASSCNEQSHFQSLLRPSFSLSRSHTNATDSRHQHWYLNHQPLRIPIASNQIQRMDTSGKIAPMRPSQFLEEKRWPPLEIMNNHQSNKFKTTPANVIVGSQAVERSTGNNTSIREYLSHPNDIVKLAFDPPFRIKLNEEKLQKDKQDLPHLQLGLSHTDGTGDGKIEHCRETQEISTKLSLS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00081 374 MobiDBLite consensus disorder prediction 1 85 - -
Gabi4183g00081 374 FunFam Myb family transcription factor 91 149 - -
Gabi4183g00081 374 Pfam Myb-like DNA-binding domain 95 145 IPR001005 -
Gabi4183g00081 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 149 IPR017930 -
Gabi4183g00081 374 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 188 IPR046955 GO:0003700
Gabi4183g00081 374 MobiDBLite consensus disorder prediction 20 40 - -
Gabi4183g00081 374 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 148 IPR006447 GO:0003677
Gabi4183g00081 374 MobiDBLite consensus disorder prediction 347 374 - -
Gabi4183g00081 374 SUPERFAMILY Homeodomain-like 91 147 IPR009057 -
Gabi4183g00081 374 Gene3D - 92 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00081 Gabi-Chr4183 641675 644575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00081 28 152 G2-like Transcription Factor Family AT2G42660 54.762 4.34e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4183g00081 Myb_DNA-binding 2.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00081 - - gmx:102669757 459.144