Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00078 ATGGGAATGAGATGGAACACATTTGGATTTTTGCTTAGAATTTATGTTTCCTTGATTTCTGTGTGGGGAATCCGAGAGTGTTGGTCGCTTAATGATGAAGGATTGGCTTTGTTGGAGTTCCGGGCTAGAATAACTTCTGATCCTTATGATGCTTTGGCAAATTGGAACCCAAATGATTGTGACCCCTGCAAGTGGTTGGGTGTTCATTGTGTCGATGGTAAAGTGCAAATACTGGACCTAAGTGGCCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAGCTTAGTCACTTAAAATCTCTTGTGTTAAGCAAAAATAACTTTTCTGGTGCCATTCCCAAAGAACTTGGAGATCTAGCCAACCTGGAGTTATTGGATTTAAGGGAGAATAACTTGTCAGGAAGCATTCCAGCAGAAATTGGCAGGTTGTTATTACTAAAACACTTGTTGCTTTGTGACAATAAAATTGAAGGCGGTAATTCTCAAGATCAAGGAAAATTCAGATTTCCATATAAATCGCTACTTGTTGACAATTGTTCATCAACTCTGACAACTTTAGTTGCTTGTATCAATAGAAAGTTTGGTCACTGTGTATGGCAGAGCAACTTCAAGCAATGGAACAACACATCAACTTTAATTAAAACAGCACTTATGAAATACCTCAATGCCTTTGCGCTGCCACTGTTCAATCTAGGAACTCATGCTCCTCATGATCTTGAAGAGAATTGCTGTGACCTTCTGCCTAGTTCTAATGAGCCAGAAATTGCTCAGAATGCACCTAATCTTGTCAATTCTGCACGTCGTAAGCTACTTGATCAGTCCAGTAACCTGGCAGCAGCACCTTACAGTGGACCTACTATAGAGTTTAGTTCTGTTCCAACTACACTGAGTAGTGGAGCTTTCCCTGCCGTGCCAGATGCCAATAAGAAACAAAATCAGTCACCTCCACCTCCACCTTCACCTTCCCATGCTTCTGATGGAAATCAAGCGAGTCAACAACATTCAGCTAATAGTGATTCTGGAAAGTTGTGGAGGTATATAATTATAATTGCAGTTGTGACTGTGTTGGTCATTGTTATCATAGTCCTACTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAGCCCCTGGAGGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCGATCAGAACTAGAGACTGCCTGTGAGGACTTCAGCAATATCATTTCCAGTTATGAACTGTGCACCTTATACAAAGGAACACTGTCCAGTGGAGTGGAGATTGCTGTTGTGTCCACTCTGGTTACTTCTTCCCAAGATTGGTCAAAGAAAATGGAGATGAACTATCGGAAAAAGATTGATACTTTGTCCCGCATAAACCATAAGAACTTTATTAATCTTATTGGGTACTGTGAGGAAGAAGAGCCATTCACAAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACCTATTTGAGTATCTTCATGTTAAGGAAATTGAACGTCTTGATTGGAGTGAAAGGGTGAGGATTATCATGGGCATTGCTTATTGTCTTCAGTACATGCACCATGATCTGAATACACCAGTAGCTCATAGCAACTTTAGTTCAAGTATGATCTTTTTAACAGATGATTTTGCCGCTAAGATTGCAGAGATCACTTTTGGAAACGTATCTCGAGCTAAGAAAACCGGAGGTGATTCAAAGAAATCTGAATTGCCACCACATGCTAATCTTGAAACCAATGTCTATGACTTTGGAATATTGTTGCTTGAAATCATTTCTGGGAAATTGCCTTACTCTGAAGAACAAGGCAACCTTGTGAACTGGGCTGCTGATTACTTAAATGACAAGAGAAAAATCAGCTATATGATAGATCCCACCCTGCAGTCTTTCAAGGACAATGAACTTGATGTCATCTGTGAGGTGATACAAGATTGTATCCAACCTGATCCAAGGTTAAGACCTACAATGAGGGACATAACTTCCAAATTGAGGGAAGTGCTTGGTGTGTCACCTGAGCAAGCTGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTAGAGATCTTGTCAGTGGAGGCCACTTAA 2106 0.4107 MGMRWNTFGFLLRIYVSLISVWGIRECWSLNDEGLALLEFRARITSDPYDALANWNPNDCDPCKWLGVHCVDGKVQILDLSGLSLEGTLAPELGKLSHLKSLVLSKNNFSGAIPKELGDLANLELLDLRENNLSGSIPAEIGRLLLLKHLLLCDNKIEGGNSQDQGKFRFPYKSLLVDNCSSTLTTLVACINRKFGHCVWQSNFKQWNNTSTLIKTALMKYLNAFALPLFNLGTHAPHDLEENCCDLLPSSNEPEIAQNAPNLVNSARRKLLDQSSNLAAAPYSGPTIEFSSVPTTLSSGAFPAVPDANKKQNQSPPPPPSPSHASDGNQASQQHSANSDSGKLWRYIIIIAVVTVLVIVIIVLLCIWRKRAAKVISPWRTGISGQLQKAFITGVPKLNRSELETACEDFSNIISSYELCTLYKGTLSSGVEIAVVSTLVTSSQDWSKKMEMNYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNLFEYLHVKEIERLDWSERVRIIMGIAYCLQYMHHDLNTPVAHSNFSSSMIFLTDDFAAKIAEITFGNVSRAKKTGGDSKKSELPPHANLETNVYDFGILLLEIISGKLPYSEEQGNLVNWAADYLNDKRKISYMIDPTLQSFKDNELDVICEVIQDCIQPDPRLRPTMRDITSKLREVLGVSPEQAVPRLSPLWWAELEILSVEAT 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00078 701 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gabi4183g00078 701 SUPERFAMILY Protein kinase-like (PK-like) 393 670 IPR011009 -
Gabi4183g00078 701 Gene3D Transferase(Phosphotransferase) domain 1 491 681 - -
Gabi4183g00078 701 Pfam Protein tyrosine and serine/threonine kinase 423 670 IPR001245 GO:0004672|GO:0006468
Gabi4183g00078 701 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Gabi4183g00078 701 ProSiteProfiles Protein kinase domain profile. 291 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4183g00078 701 MobiDBLite consensus disorder prediction 302 337 - -
Gabi4183g00078 701 SUPERFAMILY L domain-like 29 159 - -
Gabi4183g00078 701 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 30 175 - -
Gabi4183g00078 701 PANTHER PROTEIN MALE DISCOVERER 2 15 699 - -
Gabi4183g00078 701 Gene3D Phosphorylase Kinase; domain 1 381 490 - -
Gabi4183g00078 701 FunFam Inactive receptor-like serine/threonine-protein kinase 382 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00078 Gabi-Chr4183 615593 620514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00078 70 670 Receptor kinase-like Gene Family AT5G49660 26.158 1.03e-40 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gabi4183g00078 PK_Tyr_Ser-Thr 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00078 - - adu:107468254 955.666