Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4183g00073 | ATGGCGGACGTTGTTTCCAAGAAGGTAAACACGAACCCCATTAGCAGCAACAAGAAGGAGACACCAAATCTGATACTGGGTCGCTATGAGATTGGGAAGCTCCTTGGCCATGGAACCTTCGCGAAGGTTTACCATGCGAGGAACATCAAAACCGGTGAAGGGGTGGCCATAAAGGTGATCGACAAGGAGAAGATCCTAAAGGGTGGGTTGGTGGCACATATCAAGCGCGAGATCTCGATCCTCCGGCGTGTTCGCCACCCCAACATCGTGCAACTCTTCGAAGTTATGGCCACCAAGACCAAGATCTACTTTGTAATGGAATACGTTCGTGGGGGTGAGCTTTTCAACAAGGTTGCAAAAGGGAGGTTGAAGGAGGAGGTTGCAAGGAAGTACTTTCAGCAGTTGATCTCTGCTGTTGAGTTTTGTCACGCTAGAGGGGTGTTCCATAGGGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAACCTCAAAGTTTCTGATTTTGGGTTGAGTGCGGTGTCTGATCAAATCAGGCAAGATGGGTTGTTCCACACGTTTTGTGGGACTCCTGCTTATGTTGCTCCTGAGGTTTTGGCAAGGAAAGGTTATGATGGTGCAAAGGTTGATCTTTGGTCTTGTGGGGTTGTCTTGTTTGTGTTGATGGCAGGGTATTTGCCATTCCATGACCAGAATGTCATGGCAATGTATAAGAAGATTTACAGAGGTGAATTCAGGTGCCCTAGGTGGTTCTCACCTGACCTCTCTAGGCTCCTCACTAGGCTTCTTGATACCAAGCCCGAGACACGGATGGCTATCCCTGAGATTATGGAGAATAGGTGGTTCAAGAAAGGGTTCAAACAATCAGTATCAGAATCTGACTCTGAGGTAGAGATTAGAAGGAGGAATGCTCCATTGCCAAGACCAGCAAGTTTGAATGCTTTTGACATTATATCATTCTCTCCGGGTTTTGATCTTTCTGGATTGTTTGAGGAAAAAGGGGATGAGGCCAGGTTTGTGACTGCAGCCCCAGTTTCCAAGATCATATCAAAATTGGAGGAAATTGGTCACCTGGTTAGATTTAGTGTAAGGAAAAAAGATTGCAGGGTCAGCTTGGAGGGTACTAGAGAAGGTGTAAAAGGGCCGTTGACAATTGCTGCAGAGATATTTGAATTGACACCTTCTTTGGTTGTGGTTGAGGTGAAGAAAAAAGGAGGGGATAGAGCAGAGTATGAGAGATTTTGTAACGATGAATTGAAACCTGGGCTGCTGAATTTGATGAAGGATGAATCTGCAACTTCTTCTGGCTTGCAGACACCTACTGAGCCTTCCCTAATACGTGTGCTTTCTGAACCTGGGCACAGCATAGCTTCGGATATTGAATCTTCACTCTATGAACCTGCAGATATTGAACCTCCACTCTTTACAGTTACACCTTCTGAGATTTGA | 1452 | 0.4573 | MADVVSKKVNTNPISSNKKETPNLILGRYEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVEFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDTKPETRMAIPEIMENRWFKKGFKQSVSESDSEVEIRRRNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVTAAPVSKIISKLEEIGHLVRFSVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNDELKPGLLNLMKDESATSSGLQTPTEPSLIRVLSEPGHSIASDIESSLYEPADIEPPLFTVTPSEI | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4183g00073 | 483 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 284 | IPR011009 | - | |
Gabi4183g00073 | 483 | FunFam | Non-specific serine/threonine protein kinase | 19 | 305 | - | - | |
Gabi4183g00073 | 483 | CDD | CIPK_C | 314 | 424 | - | - | |
Gabi4183g00073 | 483 | ProSitePatterns | Protein kinases ATP-binding region signature. | 35 | 58 | IPR017441 | GO:0005524 | |
Gabi4183g00073 | 483 | Pfam | NAF domain | 310 | 366 | IPR004041 | GO:0007165 | |
Gabi4183g00073 | 483 | Pfam | Protein kinase domain | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00073 | 483 | ProSiteProfiles | NAF domain profile. | 308 | 332 | IPR018451 | GO:0007165 | |
Gabi4183g00073 | 483 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 147 | 159 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi4183g00073 | 483 | FunFam | Non-specific serine/threonine protein kinase | 310 | 428 | - | - | |
Gabi4183g00073 | 483 | CDD | STKc_SnRK3 | 28 | 282 | - | - | |
Gabi4183g00073 | 483 | FunFam | Non-specific serine/threonine protein kinase | 20 | 108 | - | - | |
Gabi4183g00073 | 483 | ProSiteProfiles | Protein kinase domain profile. | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00073 | 483 | SMART | serkin_6 | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00073 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 19 | 311 | - | - | |
Gabi4183g00073 | 483 | Gene3D | Kinase associated domain 1, KA1 | 312 | 429 | - | - | |
Gabi4183g00073 | 483 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 23 | 422 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4183g00073 | Gabi-Chr4183 | 586162 | 588012 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4183g00073 | 24 | 431 | CBL-interacting serine-threonine protein kinases | AT4G18700 | 79.043 | 0.0 | 707 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Gabi4183g00073 | Pkinase | 5.3e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4183g00073 | - | - | gmx:100790133 | 809.29 |