Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4183g00068 | ATGGCGGACGTTGTTTCCAAGAAGGTAAACACGAACCCCATTAGCAGCAACAAGAAGGAGACACCAAATCTGATACTGGGTCGCTATGAGATTGGGAAGCTCCTTGGCCATGGAACCTTCGCGAAGGTTTACCATGCGAGGAACATCAAAACCGGTGAAGGGGTGGCCATAAAGGTGATCGACAAGGAGAAGATCCTAAAGGGTGGGTTGGTGGCACATATCAAGCGCGAGATCTCGATCCTCCGGCGTGTTCGCCACCCCAACATCGTGCAACTCTTCGAAGTTATGGCCACCAAGACCAAGATCTACTTTGTAATGGAATACGTTCGTGGGGGTGAGCTTTTCAACAAGGTTGCAAAAGGGAGGTTGAAGGAGGAGGTTGCAAGGAAGTACTTTCAGCAGTTGATCTCTGCTGTTGAGTTTTGTCACGCTAGAGGGGTGTTCCATAGGGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAACCTCAAAGTTTCTGATTTTGGGTTGAGTGCGGTGTCTGATCAAATCAGGCAAGATGGGTTGTTCCACACGTTTTGTGGGACTCCTGCTTATGTTGCTCCTGAGGTTTTGGCAAGGAAAGGTTATGATGGTGCAAAGGTTGATCTTTGGTCTTGTGGGGTTGTCTTGTTTGTGTTGATGGCAGGGTATTTGCCATTCCATGACCAGAATGTCATGGCAATGTATAAGAAGATTTACAGAGGTGAATTCAGGTGCCCTAGGTGGTTCTCACCTGACCTCTCTAGGCTCCTCACTAGGCTTCTTGATACCAAGCCCGAGACACGGATGGCTATCCCTGAGATTATGGAGAATAGGTGGTTCAAGAAAGGGTTCAAACAAATTAAGTTTTATGTTGAGGATGATAGGGTTTATTACTCAGTATCAGAATCTGACTCTGAGGTAGAGATTAGAAGGAGGAATGCTCCATTGCCAAGACCAGCAAGTTTGAATGCTTTTGACATTATATCATTCTCTCCGGGTTTTGATCTTTCTGGATTGTTTGAGGAAAAAGGGGATGAGGCCAGGTTTGTGACTGCAGCCCCAGTTTCCAAGATCATATCAAAATTGGAGGAAATTGGTCACCTGGTTAGATTTAGTGTAAGGAAAAAAGATTGCAGGGTCAGCTTGGAGGGTACTAGAGAAGGTGTAAAAGGGCCGTTGACAATTGCTGCAGAGATATTTGAATTGACACCTTCTTTGGTTGTGGTTGAGGTGAAGAAAAAAGGAGGGGATAGAGCAGAGTATGAGAGATTTTGTAACGATGAATTGAAACCTGGGCTGCTGAATTTGATGAAGGATGAATCTGCAACTTCTTCTGGCTTGCAGACACCTACTGAGCCTTCCCTAATACGTGTGCTTTCTGAACCTGGGCACAGCATAGCTTCGGATATTGAATCTTCACTCTATGAACCTGCAGATATTGAACCTCCACTCTTTACAGTTACACCTTCTGAGATTTGA | 1488 | 0.453 | MADVVSKKVNTNPISSNKKETPNLILGRYEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVEFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDTKPETRMAIPEIMENRWFKKGFKQIKFYVEDDRVYYSVSESDSEVEIRRRNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVTAAPVSKIISKLEEIGHLVRFSVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNDELKPGLLNLMKDESATSSGLQTPTEPSLIRVLSEPGHSIASDIESSLYEPADIEPPLFTVTPSEI | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4183g00068 | 495 | Pfam | Protein kinase domain | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00068 | 495 | CDD | CIPK_C | 326 | 436 | - | - | |
Gabi4183g00068 | 495 | FunFam | Non-specific serine/threonine protein kinase | 322 | 440 | - | - | |
Gabi4183g00068 | 495 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 23 | 434 | - | - | |
Gabi4183g00068 | 495 | ProSitePatterns | Protein kinases ATP-binding region signature. | 35 | 58 | IPR017441 | GO:0005524 | |
Gabi4183g00068 | 495 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 147 | 159 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi4183g00068 | 495 | FunFam | Non-specific serine/threonine protein kinase | 19 | 317 | - | - | |
Gabi4183g00068 | 495 | CDD | STKc_SnRK3 | 28 | 282 | - | - | |
Gabi4183g00068 | 495 | ProSiteProfiles | NAF domain profile. | 320 | 344 | IPR018451 | GO:0007165 | |
Gabi4183g00068 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 19 | 318 | - | - | |
Gabi4183g00068 | 495 | ProSiteProfiles | Protein kinase domain profile. | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00068 | 495 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 313 | IPR011009 | - | |
Gabi4183g00068 | 495 | SMART | serkin_6 | 29 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi4183g00068 | 495 | FunFam | Non-specific serine/threonine protein kinase | 20 | 108 | - | - | |
Gabi4183g00068 | 495 | Gene3D | Kinase associated domain 1, KA1 | 322 | 441 | - | - | |
Gabi4183g00068 | 495 | Pfam | NAF domain | 322 | 378 | IPR004041 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4183g00068 | Gabi-Chr4183 | 586162 | 588012 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4183g00068 | 24 | 443 | CBL-interacting serine-threonine protein kinases | AT4G18700 | 80.866 | 0.0 | 731 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Gabi4183g00068 | Pkinase | 5.7e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4183g00068 | - | - | gmx:100790133 | 826.624 |