Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00039 ATGAAGACTTGTGATGAATGGAAACCTTTTATTGTAATGATAGCAATTGATTTTTCTTTTGCTGCTGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGAACCATTTGGTTTTTATCACGTACAGGCTGTCAATTGCTACCATTTTCATAGCCCCAATCGGCTACTTTTGGGAAAGAAATAGCAGACCCCGGCTCACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATTGTTGGGACATCAGTCACTCAATACTTTTTCCTTCTGGGAATCCAATACACCTCTGCTACCTTTGCTTGTGCTTTTGTAAATATTGTGCCTGTTTTCACATTCATAATGGCATTGCCATTTGGGTTAGAGACTGTGAACATCAAATGCAAAAGTGGGAGAGCGAAGATTCTTGGTACATTGGTGTGCATAGGTGGCGCATTGATGTTGACACTTTACAAAGGAAAGCCACTGTTTAATTTTTCTCACTATCAGTCTGAAGTGAAGCTAGCTTCTATAAGGACAACAAAGAGATGGACCATTGGTGTAATAGCATTGATTTTAGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCAAATATAAGCAAGAGATACCCATGTCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGTGCCATTCAATCAGCTGTCATTTGCTTGTGCACTGACCACAACTTGTCCATATGGGTTCTCAAGGGAAAGATACAAATAATTGCTATTCTTTATGCTGGGATGATTGGATCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTTAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTTAGCCCTCTTGTTCAGATAATGGCAGCCATGATTGATATCCCTGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGATGGGATCCATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAGAAGGGAGATGCAGAATCGTGTGATCAAGTTAGTCCAAGAAGCTGAAGAAGAAATCAAGGAACAAGAGCCGCAAATAGAACACTTGACCGTGTCTTGTGATTCTCGGTGTCACTGA 1080 0.4065 MKTCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPIGYFWERNSRPRLTFRILCYLFFSAIVGTSVTQYFFLLGIQYTSATFACAFVNIVPVFTFIMALPFGLETVNIKCKSGRAKILGTLVCIGGALMLTLYKGKPLFNFSHYQSEVKLASIRTTKRWTIGVIALILGTLFWSSWFILQSNISKRYPCQYSSTAIMTFFGAIQSAVICLCTDHNLSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSILVMIGLYILLWGKRREMQNRVIKLVQEAEEEIKEQEPQIEHLTVSCDSRCH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00039 359 Coils Coil 322 342 - -
Gabi4183g00039 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 324 - -
Gabi4183g00039 359 PANTHER WAT1-RELATED PROTEIN 8 334 IPR030184 GO:0016020|GO:0022857
Gabi4183g00039 359 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Gabi4183g00039 359 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Gabi4183g00039 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00039 Gabi-Chr4183 423168 425377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00039 7 252 Nodulin-like Gene Family AT3G30340 49.799 9.62e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00039 - - gmx:100782136 623.624