Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00026 ATGATGAAGTGGGGAGGAAGAAAAACTTCTTCAGCTTCTTCTTCTTCTGGGACTTCTTCTTGTACCTCTCATGCATCTCTTTTTTCTTGGTTGTCCAAGTTCAAGCATATGAGAATCAATTCACAGCCAAATCCTGAAAATATTAAGCAGAAGGCAAAGCAGAATTCTGCTTCTGTTGGTTCACCACAGCATTCTTGTGAGACTAGAGACAGATTCTATGGAGGGGATGATGGTGCCTTCTGCAGAGTATCGTTTGATGAAGAGGGTCTTGAAGATAAGAAAAGTAAAGATATTGATGAGAATGTCATTCCATCCTCAAGTTTCCATGGTGGTAAAATGAATGCTAAGAAACATGGAAGAAGAGAAGGCACCCTCAAGTTAAAGGAGAAGGATGTTGGTTTAGGAGAAGAAAGAAAATTGCTGAATGATAGGAAGGTTTCAATGGAGATGGATGAGTACAATCGAGAAAAGGAATATGAAGACTTAAGGAGGAGATTTGAGAGGAAAGCACAAAAGGTTTTGCAAGAGCAACTCTTGAAATTAGAAAGAGAAGCAGAGGAAGTTGAATTTGAATCAAGTAAAACAGTGGAAAAAGATATGCTGCAATTTGAATTACCTAGAACAATTTGCACACCAAGAGCACATTTTTTTGCCTCTTCTTCAGATTCAAAGAATTCTAGCCTTGGAAATATTATAGAAGACGGTGTGTTAAGTACACAGAGCTTTGAGAAAACTGAAAGGGCATCTCATAAGAAATTGAGTTCTGATAGGCAAAATTTGATACAAACTGAGGAGTTGAAGATAAAGACTAACAAACAGAGGCAACCACTTCAGAGGAGGAAATCAAAGCACAGCTCCAAGGTCAGAATACATTCTCCAAAGATGGTTTCCAAAGTTGAAATATGCAAAATAAAGGCTCTAGAAGACATGAGGAAAGCAAAACTAAAGATGAAGAAAGAAAGGTTGGAAATTTTGGAAGAAAAACCAGGATTAGATAGCTTTGCTGTGATTAAATGTTCATTAGATCCGAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCATAGAAAAACAGATTAGCCAGCCTGAAGAAATGGAAGAGCTATTAGCATGTTATCTGACATTGAATGCTGATGAATATCATGATCTCATCATCAAAGTATTCCGGCAGGTATGGTTTGACATGAGCCAACATGGTTTGGGTATTAAATCAGACATGCAATGTTGTTACTATGAATAA 1242 0.3728 MMKWGGRKTSSASSSSGTSSCTSHASLFSWLSKFKHMRINSQPNPENIKQKAKQNSASVGSPQHSCETRDRFYGGDDGAFCRVSFDEEGLEDKKSKDIDENVIPSSSFHGGKMNAKKHGRREGTLKLKEKDVGLGEERKLLNDRKVSMEMDEYNREKEYEDLRRRFERKAQKVLQEQLLKLEREAEEVEFESSKTVEKDMLQFELPRTICTPRAHFFASSSDSKNSSLGNIIEDGVLSTQSFEKTERASHKKLSSDRQNLIQTEELKIKTNKQRQPLQRRKSKHSSKVRIHSPKMVSKVEICKIKALEDMRKAKLKMKKERLEILEEKPGLDSFAVIKCSLDPKQDFRDSMIEMIIEKQISQPEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSQHGLGIKSDMQCCYYE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00026 413 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 206 397 IPR038933 GO:0045892
Gabi4183g00026 413 Pfam Transcriptional repressor, ovate 340 396 IPR006458 -
Gabi4183g00026 413 NCBIfam uncharacterized plant-specific domain TIGR01568 335 396 IPR006458 -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 101 120 - -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 273 289 - -
Gabi4183g00026 413 Coils Coil 307 327 - -
Gabi4183g00026 413 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 262 289 - -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 40 65 - -
Gabi4183g00026 413 Coils Coil 156 191 - -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 40 69 - -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 7 23 - -
Gabi4183g00026 413 ProSiteProfiles OVATE domain profile. 336 395 IPR006458 -
Gabi4183g00026 413 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00026 Gabi-Chr4183 253939 255267 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi4183g00026 Ovate 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00026 - - gmx:102666239 496.893