Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4183g00019 | ATGGCTGATAATTCATCAAGCAATGGAAACAACGAAGTGGTTTTAAATTTAAACGGTGATGCCTCCAAAAAGTGTGACGGCATCGAAGAAGACTGTGTGCCATTTTTGCAGAAGGTGGTGACAGAGGTGGTGGGGACGTACTTCTTGATATTTGCAGGATGTGGTTCGGTGGTTGTGAATCTTAACAACGACAAGGTGGTGACTCTTCCCGGGATTTCCATTGTTTGGGGACTCGCTGTTATGGTATTGGTTTATTCAGTTGGACACATCTCTGGTGCTCATTTCAACCCAGCTGTCACACTTGCTCATGCTTCCACCAAAAGATTTCCATGGAAGCAGGTGCCAGCATATATAATAGCTCAGGTGGTTGGATCCACACTTGCAAGTGGAACACTAAGACTTATATTCATGGGAAAGGATGACCATTTTGCCGGAACACTTCCCGCCGGATCTAACCTGCAAGCTTTTGTGGTCGAATTCATTATCACTTTCTACCTAATGTTCATCATTTCTGGAGTTGCCACCGATAACAGAGCGATTGGTGAGTTGGCTGGGCTTGCAGTTGGGTCAACGGTACTGCTAAATGTGATGTTTGCCGGGCCAATCACTGGAGCATCAATGAATCCAGCAAGAAGCTTGGGGCCTGCTATTGTGCACAGTGAATACAAAGGAATATGGATATACTTGGTCTCACCCATTCTGGGTGCTGTGGCTGGTACATGGACATATAATTTCGTCAGATACACAAACAAGCCAGTGCGTGAGCTCACCAAGAATGCCTCTTTTCTCAAAGGAAAAGGAAGATGTGGTTCGGTGGTTGTGAACCTTAACAACGACAAGGTGGTGACTCTTCCCGGGATTTCCATTGTTTGGGGACTCGCTGTTATGGTATTGGTTTATTCAGTTGGACACATCTCTGGTGCTCATTTCAACCCAGCTGTCACACTTGCTCATGCTTCCACCAAAAGATTTCCATGGAAGCAGGTGCCAGCATATATAATAGCTCAGGTGGTTGGATCCACACTTGCAAGTGGAACACTAAGACTTATATTCATGGGAAAGGATGACCATTTTGCTGGAACACTTCCCGCCGGATCTAACCTGCAAGCTTTTGTGGTCGAATTCATTATCACTTTCTACCTAATGTTCATCATTTCTGGAGTTGCCACCGATAACAGAGCGATTGGTGAGTTGGCTGGGCTTGCAGTTGGGTCAACGGTACTCCTAAATGTGATGTTTGCAGGGCCAATCACTGGAGCATCAATGAATCCAGCAAGAAGCTTGGGGCCTGCTATTGTGCACAGTGAATACAGAGGAATATGGATATACTTGGTCTCACCCATTCTGGGAGCTGTGGCTGGTACATGGGCCTATAATTTCATCAGATACACAAACAAGCCAATGCGTGAGCTCACCAAGAGTGCCTCTTTCCTCAAAGGAAAAGGAAGTGGTGGAGCTGAGTGA | 1464 | 0.4604 | MADNSSSNGNNEVVLNLNGDASKKCDGIEEDCVPFLQKVVTEVVGTYFLIFAGCGSVVVNLNNDKVVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAHASTKRFPWKQVPAYIIAQVVGSTLASGTLRLIFMGKDDHFAGTLPAGSNLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHSEYKGIWIYLVSPILGAVAGTWTYNFVRYTNKPVRELTKNASFLKGKGRCGSVVVNLNNDKVVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAHASTKRFPWKQVPAYIIAQVVGSTLASGTLRLIFMGKDDHFAGTLPAGSNLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHSEYRGIWIYLVSPILGAVAGTWAYNFIRYTNKPMRELTKSASFLKGKGSGGAE | 487 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 76 | 100 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 113 | 132 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 226 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 158 | 176 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 189 | 211 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PRINTS | Major intrinsic protein family signature | 37 | 56 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | NCBIfam | MIP family channel protein | 42 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | NCBIfam | MIP family channel protein | 272 | 458 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | PANTHER | AQUAPORIN NIP2-1 | 24 | 262 | IPR034294 | - | |
Gabi4183g00019 | 487 | Gene3D | Glycerol uptake facilitator protein. | 263 | 474 | IPR023271 | - | |
Gabi4183g00019 | 487 | Gene3D | Glycerol uptake facilitator protein. | 2 | 261 | IPR023271 | - | |
Gabi4183g00019 | 487 | CDD | MIP | 37 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | ProSitePatterns | MIP family signature. | 309 | 317 | IPR022357 | - | |
Gabi4183g00019 | 487 | SUPERFAMILY | Aquaporin-like | 34 | 257 | IPR023271 | - | |
Gabi4183g00019 | 487 | Pfam | Major intrinsic protein | 279 | 458 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | Pfam | Major intrinsic protein | 33 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | CDD | MIP | 269 | 461 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gabi4183g00019 | 487 | ProSitePatterns | MIP family signature. | 94 | 102 | IPR022357 | - | |
Gabi4183g00019 | 487 | SUPERFAMILY | Aquaporin-like | 269 | 472 | IPR023271 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4183g00019 | Gabi-Chr4183 | 163579 | 188036 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4183g00019 | 269 | 479 | Major Intrinsic Protein MIP | AT5G37810 | 63.033 | 3.33e-90 | 275 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4183g00019 | K09874 | - | gmx:100786924 | 454.521 |