Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00016 ATGACTTTAAATCTTTGTGTATTAACCCCCAATCGAATTGTTTGGGATTCAGAAGTGAGGGAAATTATTTTATCTACTAATAGTGGACAAATTGGAGTATTACCAAATCATGCACCTATTGCCACAGCTATAGATATAGGTATTTTGAGAATCCGCCTTAACGACCGATGGTTAACAATGGCTCTAATGGGAGGTTTTGCTAGAATAGGCAATAATGAAATCATTGTTTTAGTAAATGATGCAGAGAGGGGTAGTGACATTGATCCGCAAGAAGCACAACAAACTCTTGAACTAGCAGAAGCTAACTTGAATAAGGCTAAGGGCAAGAGACAAACAATTGAGGCAAATCTAGTTCTCCGACGAGCTAGAACACGAGTAGAGGCTATCAATATGATTTCGTAA 402 0.3806 MTLNLCVLTPNRIVWDSEVREIILSTNSGQIGVLPNHAPIATAIDIGILRIRLNDRWLTMALMGGFARIGNNEIIVLVNDAERGSDIDPQEAQQTLELAEANLNKAKGKRQTIEANLVLRRARTRVEAINMIS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00016 133 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 81 IPR020546 GO:0015986
Gabi4183g00016 133 Hamap ATP synthase epsilon chain [atpC]. 1 128 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi4183g00016 133 FunFam ATP synthase epsilon chain, chloroplastic 1 87 - -
Gabi4183g00016 133 Gene3D - 89 133 - -
Gabi4183g00016 133 Gene3D - 1 87 IPR036771 -
Gabi4183g00016 133 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 3 130 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi4183g00016 133 Coils Coil 96 116 - -
Gabi4183g00016 133 CDD F1-ATPase_delta 3 123 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gabi4183g00016 133 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 129 IPR020547 -
Gabi4183g00016 133 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 1 83 IPR036771 -
Gabi4183g00016 133 NCBIfam ATP synthase F1 subunit epsilon 2 130 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00016 18 109 Primary Pumps ATPases AT5G47030 30.000 4.38e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00016 K02114 - mnt:24286632 246.128