Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00009 ATGGCAACAAGGAAAGGCAAAGCCATAGGCATTGACCTTGGCACAACCTACAGCTGCATCGCAGTGTGGCAACGCAACCGTGTTGAGGTCATTCCAAATGACCAAGGAAACCGCACAACACCTTCTTACGTTGCCTTCACTGATTCTGAAAGGTTATTGGGCGATGCTGCCAGGAACCAGGTAGCCATTAATCCACACAACACCGTTTTCGACGCCAAACGTTTGATTGGTCGGCGATTCTCCGACCCATTAGTTCAACAAGACATGAAGGTATGGCCTTTCAAGGTTGTCCCTGGCACCAGAGACAAGCCCATGATTGTGGTCACATATAAAGGGGAAGAGAAACATCTTGCAGCTGAAGAAATATCTTCCATGGTGTTGTCCAAGATGAAGGAAGTTGCTGAGGCGTATCTGGGTCATGCAGTGAAGCATGCTGTGATCACTGTCCCTGCTTACTTCAACAACTCACAGAGACAGGCCACTAAGGATGCAGGGGAAATCGCAGGTTTCAACGTGATGAGGATCATCAACGAACCTACTGCAGCTGCTATTGCTTACGGGTTGGACAAGAAGGAGTGGAGAAAAGGTGAGAAGAACGTGCTCGTGTTTGATCTTGGTGGTGGTACTTTTGATGTTTCCTTGGTGACCATCGATGAAGGGATGTTCAAAGTTAAGGCCACAGTGGGAGATACCCATTTGGGTGGTGTGGATTTTGATAACAATATGGTGAATTATCTTGTGGATGTGTTTAAGAGGAAGTACAAGAAGGACATTAGTGAGAATGCTAAAGCTCTTGGGAGGTTAAGGTCGGCGTGTGAGAAAGCTAAGAGGTTATTGTCTTCAACTTCCCAGACCACTATTGAGCTTGATTCTTTATGTGGAGGGGTTGATCTATATGCCACTGTTACAAGGGCGTTGTTCGAGGAATTGAACAAGGACTTGTTCATAAAGTGTATGGAGACGGTGGAGAAGTGCCTCGTTGAGGCAAAGATTGGTAAATTTCAAGTCCATGAGTTTGTTCTTGTAGGTGGGTCTACTAGAATTCCAAAAGTTCAGCAACTATTGAAGGACATGTTTAGTGTCAATGGCAAAGTCAAAGAGCTATGCAAAAGCATTAACCCTGATGAAGCCGTGGCATATGGTGCAGCAGTTCAGGCTGCGATCTTGAGTGGTGAAGGAGATAAGAAAATCAGGAGAATGGTGAGAGATGCAGAGAGGTATAAGGCAGAGGATGAGGAGGTGAGAAAGAAGGTGAAGGCTAAGAACTCGCTTGAGAATCTTGCTTATGAATTGAGGGATAGAGTGAAGAAGCTTGAGAAGGCAGTGGAAGACACCATAGAATGGCTTGACAGAAACCAATTGGCTGAAACTGATGAGTTTGAGTACAAGAAGATGGAGTTGAAAAGGGATATGCAATTTCTGTCAGTGTAA 1431 0.4528 MATRKGKAIGIDLGTTYSCIAVWQRNRVEVIPNDQGNRTTPSYVAFTDSERLLGDAARNQVAINPHNTVFDAKRLIGRRFSDPLVQQDMKVWPFKVVPGTRDKPMIVVTYKGEEKHLAAEEISSMVLSKMKEVAEAYLGHAVKHAVITVPAYFNNSQRQATKDAGEIAGFNVMRIINEPTAAAIAYGLDKKEWRKGEKNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNNMVNYLVDVFKRKYKKDISENAKALGRLRSACEKAKRLLSSTSQTTIELDSLCGGVDLYATVTRALFEELNKDLFIKCMETVEKCLVEAKIGKFQVHEFVLVGGSTRIPKVQQLLKDMFSVNGKVKELCKSINPDEAVAYGAAVQAAILSGEGDKKIRRMVRDAERYKAEDEEVRKKVKAKNSLENLAYELRDRVKKLEKAVEDTIEWLDRNQLAETDEFEYKKMELKRDMQFLSV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00009 476 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gabi4183g00009 476 Gene3D - 191 369 - -
Gabi4183g00009 476 Pfam Hsp70 protein 8 393 IPR013126 GO:0005524|GO:0140662
Gabi4183g00009 476 PANTHER HEAT SHOCK PROTEIN 70KDA 8 391 IPR013126 GO:0005524|GO:0140662
Gabi4183g00009 476 FunFam Heat shock protein 70 9 198 - -
Gabi4183g00009 476 FunFam heat shock 70 kDa protein-like 362 391 - -
Gabi4183g00009 476 FunFam Heat shock 70 kDa 234 317 - -
Gabi4183g00009 476 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gabi4183g00009 476 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 420 470 IPR029048 -
Gabi4183g00009 476 SUPERFAMILY Actin-like ATPase domain 197 389 IPR043129 -
Gabi4183g00009 476 Gene3D - 393 474 IPR029048 -
Gabi4183g00009 476 Gene3D - 70 125 - -
Gabi4183g00009 476 Coils Coil 397 417 - -
Gabi4183g00009 476 Coils Coil 421 441 - -
Gabi4183g00009 476 Gene3D Actin; Chain A, domain 4 234 317 - -
Gabi4183g00009 476 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Gabi4183g00009 476 Gene3D - 9 387 - -
Gabi4183g00009 476 FunFam Heat shock 70 kDa protein 70 125 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 7 20 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 208 218 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 35 47 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 57 65 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 372 392 - -
Gabi4183g00009 476 PRINTS 70kDa heat shock protein signature 145 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00009 Gabi-Chr4183 96954 99227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00009 5 468 Calmodulin-binding Proteins AT5G02500 71.548 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00009 K03283 - gmx:100788531 671.003