Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4183g00008 ATGGCAACAAGGAAAGGCAAAGCCATAGGCATTGACCTTGGCACAACCTACAGCTGCATCGCAGTGTGGCAACGCAACCGTGTTGAGGTCATTCCAAATGACCAAGGAAACCGCACAACACCTTCTTACGTTGCCTTCACTGATTCTGAAAGGTTATTGGGCGATGCTGCCAGGAACCAGGTAGCCATTAATCCACACAACACCGTTTTCGACGCCAAACGTTTGATTGGTCGGCGATTCTCCGACCCATTAGTTCAACAAGACATGAAGGTATGGCCTTTCAAGGTTGTCCCTGGCACCAGAGACAAGCCCATGATTGTGGTCACATATAAAGGGGAAGAGAAACATCTTGCAGCTGAAGAAATATCTTCCATGGTGTTGTCCAAGATGAAGGAAGTTGCTGAGGCGTATCTGGGTCATGCAGTGAAGCATGCTGTGATCACTGTCCCTGCTTACTTCAACAACTCACAGAGACAGGCCACTAAGGATGCAGGGGAAATCGCAGGTTTCAACGTGATGAGGATCATCAACGAACCTACTGCAGCTGCTATTGCTTACGGGTTGGACAAGAAGGAGTGGAGAAAAGGTGAGAAGAACGTGCTCGTGTTTGATCTTGGTGGTGGTACTTTTGATGTTTCCTTGGTGACCATCGATGAAGGGATGTTCAAAGTTAAGGCCACAGTGGGAGATACCCATTTGGGTGGTGTGGATTTTGATAACAATATGGTGAATTATCTTGTGGATGTGTTTAAGAGGAAGTACAAGAAGGACATTAGTGAGAATGCTAAAGCTCTTGGGAGGTTAAGGTCGGCGTGTGAGAAAGCTAAGAGGTTATTGTCTTCAACTTCCCAGACCACTATTGAGCTTGATTCTTTATGTGGAGGGGTTGATCTATATGCCACTGTTACAAGGGCGTTGTTCGAGGAATTGAACAAGGACTTGTTCATAAAGTGTATGGAGACGGTGGAGAAGTGCCTCGTTGAGGCAAAGATTGGTAAATTTCAAGTCCATGAGTTTGTTCTTGTAGGTGGGTCTACTAGAATTCCAAAAGTTCAGCAACTATTGAAGGACATGTTTAGTGTCAATGGCAAAGTCAAAGAGCTATGCAAAAGCATTAACCCTGATGAAGCCGTGGCATATGGTGCAGCAGTTCAGGCTGCGATCTTGAGTGGTGAAGGAGATAAGAAAGTGGAGGAATTGTTGTTGCTTGATGTCATGCCGCTTAGTCTTGGTGTTGAGACTGATGGTGGTGTCATGTCTGTGTTGATTCCAAAGAATACAATGATCCCCACCAAGAAGGAAAGTGTTTTCTCAACCACACAAGATAATCAAACTAATGTTTTGGTCAAAGTATATGAGGGAGAGCGAGCTAAGACACAGGATAACTTCCTTCTCGGGAAGTTTGAGCTCTCTGGGTTCCCTCCAGCACAAAGAGGAGACCCAAAGATTACTGTTAGCTTTGATATAAATAAGGTGAAGGCTAAGAACTCGCTTGAGAATCTTGCTTATGAATTGAGGGATAGAGTGAAGAAGCTTGAGAAGGCAGTGGAAGACACCATAGAATGGCTTGACAGAAACCAATTGGCTGAAACTGATGAGTTTGAGTACAAGAAGATGGAGTTGAAAAGGGATATGCAATTTCTGTCAGTGTAA 1653 0.4471 MATRKGKAIGIDLGTTYSCIAVWQRNRVEVIPNDQGNRTTPSYVAFTDSERLLGDAARNQVAINPHNTVFDAKRLIGRRFSDPLVQQDMKVWPFKVVPGTRDKPMIVVTYKGEEKHLAAEEISSMVLSKMKEVAEAYLGHAVKHAVITVPAYFNNSQRQATKDAGEIAGFNVMRIINEPTAAAIAYGLDKKEWRKGEKNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNNMVNYLVDVFKRKYKKDISENAKALGRLRSACEKAKRLLSSTSQTTIELDSLCGGVDLYATVTRALFEELNKDLFIKCMETVEKCLVEAKIGKFQVHEFVLVGGSTRIPKVQQLLKDMFSVNGKVKELCKSINPDEAVAYGAAVQAAILSGEGDKKVEELLLLDVMPLSLGVETDGGVMSVLIPKNTMIPTKKESVFSTTQDNQTNVLVKVYEGERAKTQDNFLLGKFELSGFPPAQRGDPKITVSFDINKVKAKNSLENLAYELRDRVKKLEKAVEDTIEWLDRNQLAETDEFEYKKMELKRDMQFLSV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4183g00008 550 Gene3D - 191 369 - -
Gabi4183g00008 550 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gabi4183g00008 550 Coils Coil 495 515 - -
Gabi4183g00008 550 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 507 IPR029047 -
Gabi4183g00008 550 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Gabi4183g00008 550 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 490 IPR029047 -
Gabi4183g00008 550 FunFam Heat shock 70 kDa protein 70 125 - -
Gabi4183g00008 550 Gene3D - 9 386 - -
Gabi4183g00008 550 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 7 20 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 372 392 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 208 218 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 480 496 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 145 165 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 35 47 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 399 418 - -
Gabi4183g00008 550 PRINTS 70kDa heat shock protein signature 57 65 - -
Gabi4183g00008 550 SUPERFAMILY Actin-like ATPase domain 197 389 IPR043129 -
Gabi4183g00008 550 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 494 544 IPR029048 -
Gabi4183g00008 550 Gene3D Actin; Chain A, domain 4 234 317 - -
Gabi4183g00008 550 PANTHER HEAT SHOCK PROTEIN 70KDA 8 502 IPR013126 GO:0005524|GO:0140662
Gabi4183g00008 550 Gene3D - 70 125 - -
Gabi4183g00008 550 Pfam Hsp70 protein 8 542 IPR013126 GO:0005524|GO:0140662
Gabi4183g00008 550 FunFam Heat shock protein 70 9 198 - -
Gabi4183g00008 550 FunFam Heat shock 70 kDa 234 317 - -
Gabi4183g00008 550 Gene3D - 491 546 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4183g00008 Gabi-Chr4183 96954 99228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4183g00008 5 542 Calmodulin-binding Proteins AT3G12580 66.281 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4183g00008 K03283 - gmx:100788531 878.241