Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4176g00074 ATGAAAGGGCGATCTCACCGCCCTCAGAGTTCGGACCCACCGGACGAATGGGTCGACGGTACCTGGACCGTGGACTGCATCTGCGGCGTCAACTTCGACGACGGCGAAGAGATGGTGAAATGCGACGAGTGCGGCGTGTGGGTGCACACGCGCTGCTCTCGTTATGTTAAGGGGGACGACACCTTCGTCTGCGACAAATGCAAGAGCAAGAACAACCGAGTTGAGAATAACACCGAGGAAACTGAGGTTGCCCAATTGTTAATCGAGCTCCCCACAAAGACTATGTCTTTGGAGAATAGCAATTCTCTTGCATCGAAAGTTGCATCTCATTCGCGCCGCCCTTTCAAGCTTTGGACTGATATACCCATGGAGGAGAGGGTTCACGTTCAAGGAATCCCCGGTGGTGATCCTTCTCTCTTTGCCGGCAAGAGCGTTTCCTCGATTTTCAGTCCACACTTATGGAAATGCACTGGTTATGTTCCCAAGAAGTTTAATTTTCAGTATAGGGAGTTTCCTTCTTGGGATGAGAATGAGAATGCACAAGATAATGATAATGGGGCTGGGGTTTTGTTCTCTTTCTCGAAAGAGACTACTACTGTCTTGGCTTCCCCTGTTGCGGCTTTGGTTGACATGAGATCCAGGGATGGCGATGACAGCAAGACGTCTTTCAAGGACATGAGCAATTTAGGCAGTGGCAGTGAAGATACACCGTATGCCCACAATTCCATTAAGAAGGAGAGGAGTTTGCTGAGGCCTCTTGTTGTTCATAGCAGTAAGGGAAGGAAAGAGGACTTCGGGACTTCCAATTCCAAAGACAGGAGTGGGAAGAAGCGGGTTAAGACTCCTGATAAAGAGGTAGATCTCAAGAGGAGAAGTTCACATTCTTCTAAAACAGCGTTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCCGAAGATTTTCAAGGCTGGCAATCGGAGCATAAGGAATAAAAACTTAAAAGACATTGTGGTTCAGGAATATAGTTTGAATGATTATTTTGCTGTGGATACCATCGTGGAAGAGCCAAATAACAACTTGACAGCTACTGAGGATTCTTCAGAAGCCTTTTATCCTGACACAACAAGACATAGTCTTTCTGTTGGAGATGTATTAGCAGGAGAAAAGACTGGCCATAAAGATCCTAGTTTGGTTGAGATGTCTTCTAAGACTGATGATGCTGTTACATCAGTTTTAAAGCATAATTATGTTGGAAATACTTCAGTTGAAGAAAAGGACGGAGATTGCTTGGCAGCTGATAATGCAGATGATACTTTAGTAGTAAGAAGCACTGTGAGTCCTAACATAGAAGATCATTGTGGTTCTGCACCCGAACTTGTGGAGAACCAAGTTTCTCAAGATTTTGACTGTAACCTGCGTCCTAGCCCTGCAAAATGCAAAGTTAAGGTGAATAGAGAAGAAGATGATGATAGTTTTAGGAAGATCTTGAATTTTCATTCTTCTCCTATAAGTGATCTTAAAAATAATGAAAAACCATGTGATCACACTTCTGATATTGTTAAAGTGAATGATGCTGTATTTCCCAGTTTACCATCATCTGAAAATAAGGTGGGAGATATTGACATATTGTCAGAAGTAGTTGCTGATGATCTTACCAATAAACCTGATGAATTATCTGGTGATTTTTGTCATGGAAAACAAGAACTGGAGGGGTCTGAAGGTTCATTGGAAACACAAAAGGGTTTTTCAGAAACAAAAGATGGTTCGGATTCTGCTAAAGATCCATCAAAAATTGAAGCACTTGGATGTCCACACACGTCAACCATGAAATCCAGATCATTGGCTCATGACTTTAAATCTGAAGATACTGAAATCCCCAATTCTTTTATAAAACATGGAGCGATGGATAATTGTAACATCCACATAAAGAATGAAAGTTGTTCGAGTGATGCTGCAAGGGATGAAATTCCAAGGAAGCCTGTAAGAGAGCGACAAAAATCCTCTTTAAATTCTAATTCAAAAGGATTGCATTCAAGCAGGAGTACGCAAAATTCTGTTTCAAAGCAAGTAAATTCAGATGCGAGAGATTCTGTTCATTGTTCATCTTCTAAGCCATCTCTGATACATAGTGAGGTTAATGCATCATTGCACCATCAAAAGGCTTTACCAGTGCAGAATAAGATTTCATCTTCAGTTCCACAGAAAGTTGAAAAGCTTAACCAAACAAACGTCCTTTCTTCCTCTAAGTTGAACCAGAGTCACGTGCTATCAATGAATCCTTCTCCAACTTCAAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTTTGCTATTGCATCAAGAACTGAATAGTTCGCCCCGTGTACCTCGTGTACCCCGAGCACGCCATGCAGGTAGTTTGCCACAGTTGACTTCTACTAGTGCTACAAGCATGCTAATGAAGCGAACATCATCGGTTGGAGGAAAAGATCATTATTTGGGATCTAGACGAAAATCCAAGGATGCATCTAGAGATGGGTTTTGTAGTCCTCGAGAACTTGAAGATGAAGCTAAAAGGACAGAGAAGGAGAAGGGTTCATCTTCGTCTGATCAAAGGAAACAAGATATGGCATATGTGGAAGATGCATCTGTAAAGGAAGAAGGCCTTGCATCTATGACAGCTGTAAACTCTATCACTGACAATGTTGTTTCTGCCGCCTCTGCGATTGCAAACATTAGTCCACCCTCCCCTCCTGACGATCAGAATTTATCTGATGATGATACTGCAACTGCTGGAAGGCCAGTTCACCGTACCTTACCTGGCTTGATTAATGATATTATGAGCAAAGGCAAGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCAGAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACACAAGTCACTCTCAGGCTGTTCTTGATTGCTTGAGGAACCGACATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGCTGGATGCTGAAGAATCTGATGATAACGGATATGGCAAGGGAAGAACTGCAAAGGAGGTTGAAGGGAAGAACTTTGAGCTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTGGCTCTTCAGGGAAGAGCAGTAAAGGATGTCAGGAGGAAACAAAAAGCTGACTCGCTAACCGAGGAGGATGTCGGTCAATTCTCCAATTCCAGTGAAGAGAGCATGTTTAGTGAGGATGAAATTCAGGTTGGCAGAATATGTCCAGCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTGA 3333 0.4305 MKGRSHRPQSSDPPDEWVDGTWTVDCICGVNFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFVCDKCKSKNNRVENNTEETEVAQLLIELPTKTMSLENSNSLASKVASHSRRPFKLWTDIPMEERVHVQGIPGGDPSLFAGKSVSSIFSPHLWKCTGYVPKKFNFQYREFPSWDENENAQDNDNGAGVLFSFSKETTTVLASPVAALVDMRSRDGDDSKTSFKDMSNLGSGSEDTPYAHNSIKKERSLLRPLVVHSSKGRKEDFGTSNSKDRSGKKRVKTPDKEVDLKRRSSHSSKTAFTPTSDAKQLEFYEDRGPKIFKAGNRSIRNKNLKDIVVQEYSLNDYFAVDTIVEEPNNNLTATEDSSEAFYPDTTRHSLSVGDVLAGEKTGHKDPSLVEMSSKTDDAVTSVLKHNYVGNTSVEEKDGDCLAADNADDTLVVRSTVSPNIEDHCGSAPELVENQVSQDFDCNLRPSPAKCKVKVNREEDDDSFRKILNFHSSPISDLKNNEKPCDHTSDIVKVNDAVFPSLPSSENKVGDIDILSEVVADDLTNKPDELSGDFCHGKQELEGSEGSLETQKGFSETKDGSDSAKDPSKIEALGCPHTSTMKSRSLAHDFKSEDTEIPNSFIKHGAMDNCNIHIKNESCSSDAARDEIPRKPVRERQKSSLNSNSKGLHSSRSTQNSVSKQVNSDARDSVHCSSSKPSLIHSEVNASLHHQKALPVQNKISSSVPQKVEKLNQTNVLSSSKLNQSHVLSMNPSPTSNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSTSATSMLMKRTSSVGGKDHYLGSRRKSKDASRDGFCSPRELEDEAKRTEKEKGSSSSDQRKQDMAYVEDASVKEEGLASMTAVNSITDNVVSAASAIANISPPSPPDDQNLSDDDTATAGRPVHRTLPGLINDIMSKGKRMTYEELCNAVLPHWQNLRKHNGERYAYTSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKGRTAKEVEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRKQKADSLTEEDVGQFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 648 664 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 902 928 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 798 815 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 223 238 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 993 1110 - -
Gabi4176g00074 1110 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 75 IPR013083 -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 665 703 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 823 872 - -
Gabi4176g00074 1110 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 259 294 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 1072 1088 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 212 243 - -
Gabi4176g00074 1110 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 784 872 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 1054 1071 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 259 302 - -
Gabi4176g00074 1110 PANTHER UNCHARACTERIZED 1 1102 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 993 1040 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 648 703 - -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 565 613 - -
Gabi4176g00074 1110 SMART PHD_3 25 68 IPR001965 -
Gabi4176g00074 1110 MobiDBLite consensus disorder prediction 902 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4176g00074 Gabi-Chr4176 696235 703327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4176g00074 24 67 PHD Transcription Factor Family AT5G22260 42.553 9.89e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4176g00074 - - gmx:100810855 1557.35