Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4176g00035 ATGGAGCCTCACTTTGCAGTTGCGCTTCCATTGATGTTCCTAATTACTCCTTGGCTTTTATTGGCTAACGCTGAAAGGTCCACATACATAGTTCATATGGACAAGTCCCTCATGCCTCGTGTCTTTGCAAGCCATAATGATTGGTATGAATCCACCATTCATTCCATAAAGTTATCAACAGCTGATCATCATCCATCAAAGCAATCACAGAAATTAGTGTACACATACAACCATGCCATGCATGGATTCAGTGCAATGCTATCATCAAATGAGTTGGGGACACTAAAGAACAGTCATGGTTTTGTCTCAGCTTACCCAGACAGGTCTGCCACCATAGACACCACTCACACCTTTGAGTTTCTCTCACTCGATTCCTCCTATGGCCTATGGAATGCTTCAAATTTAGGGGAGGATATGATTGTTGGTCTTATTGACACTGGTATCTGGCCTGAGAGTGAGAGCTTCAAAGATGATGGCATGACCAAAAAAATCCCAACCAAATGGAAAGGAACATGTGAGCCAGGACAAGAATTCAACACTTCCATGTGTAACTTCAAACTAATTGGAGCTAGATATTTCAACAAGGGTTTGATTGCAGCAAATCCTAATGTCACAATAAGCATGAACTCAGCTAGAGACACAACGGGCCATGGAACCCACACATCATCAACAGTTGCAGGCAACTATGTTAATGGAGCCTCTTTCTTTGGCTACGGTGAAGGTGTAGCAAGAGGCATTGCACCACGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGATGAAGGAGAACAAGCCTCTGATGTTCTTGCTGGAATGGACCAAGCAATTGCTGATGGGGTTGATGTCATTTCCATTTCTTTTGGTTTCAATAATGTTCCACTTTATGAGGATCCTGTAGCAATAGCTGGTTTTGCAGCAATGGAGAAAGGGGTTGTGGTTTCATCTTCTGCAGGCAACGATGGTCCCCAACTTGGTACTTTGCACAATGGAATCCCCTGGGTTCTTACCGTGGCAGCAGGCACCATTGATCGCACATTTGGTAGTTTGACATTAGGAAATGGCAAAACCATTATTGGTTTGACCTTGTTTGCGGCAAACGCTATTGTGGAAAATCTTCAACTTGTCTACAACAAAAATCTATCAGCATGTAACTCAGTCAATCTGTTATCTGAAGCAGCCACAAGAGGGATCATTGTATGTGATAACTTAGACTCTGTCTCTGTCATTAATCAATCCAATTACATCTCTGAAGCTGGTGTCTTAGGAGCTGTATTTATCTCTGAGGATCCGCGTCTAATTGAATTAGGACGTTTGCACTCTCCAAGTATAGTAATAAACCCAAAGGAAGGACCATCAGTGATAAACTATGCAAAAAGTGTTGAGACACCAACTGCAAGCATCAAATTTACACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTGCCAATTACACTTCAAGAGGTCCTTCTCCAAGTTATCCAGGGATCTTGAAGCCTGATATAATGGCACCTGGCACTACTGTTCTGGCTGCTTTTGTTCCAAATAAACCAGCAGCTAGAATTGGGAATAATGTGCTTTTACCCAGTGGTTTTAATTTTCTGTCTGGAACATCCATGGCTTGTCCTCATGTATCTGCTGTTGCTGCTCTTCTTAAGGCTTCACACCCAGAATGGACTCCAGCTGCTATAAAATCTGCATTAGTCACCACTGCTAATCCTCTTGATAATACCCAAAATCCAATAAGGGATAATGGTAACCCATCTCGTCAACATGCTTCTCCTCTTGCCATGGGAGCTGGTGAGATTGATCCTAATAGAGCACTCGATCCAGGACTCATATATGATGCTACCCCACAAGACTATATCAACCTCCTTTGCTCTTTGGGCTACACACACAACCAAATCTTGACTATCACAAGGTCAAACTCGTTTAACTGTACAAACCCATCATCTGATCTTAACTACCCTTCGTTTATTGCTTTGTACGGTAACAAAACAAGGTCCATAGTCAACGAGTTTCGGAGGACTGTTACCAATGTGGGAGATGGTGCTGCTACATACAGAGCCAAGGTGAAGTCACCCAGGGGCTCTGTGGTTAGAGTGTCACCTGAGAAGCTAGCTTTCGGGTATAAGAATGAGAAGCAGTGCTACTCTGTTGTTATAAACTATACGAGGTACAAGAAGGAAAACGTATCGTTTGGTGAGATTGTTTGGGTTGAAGAGGGTGGTGCACACAGGGTAAGGAGCCCTATTGTAGTGGCACCAATGTGA 2274 0.4323 MEPHFAVALPLMFLITPWLLLANAERSTYIVHMDKSLMPRVFASHNDWYESTIHSIKLSTADHHPSKQSQKLVYTYNHAMHGFSAMLSSNELGTLKNSHGFVSAYPDRSATIDTTHTFEFLSLDSSYGLWNASNLGEDMIVGLIDTGIWPESESFKDDGMTKKIPTKWKGTCEPGQEFNTSMCNFKLIGARYFNKGLIAANPNVTISMNSARDTTGHGTHTSSTVAGNYVNGASFFGYGEGVARGIAPRARLAMYKVLWDEGEQASDVLAGMDQAIADGVDVISISFGFNNVPLYEDPVAIAGFAAMEKGVVVSSSAGNDGPQLGTLHNGIPWVLTVAAGTIDRTFGSLTLGNGKTIIGLTLFAANAIVENLQLVYNKNLSACNSVNLLSEAATRGIIVCDNLDSVSVINQSNYISEAGVLGAVFISEDPRLIELGRLHSPSIVINPKEGPSVINYAKSVETPTASIKFTQTFVGIKPAPAVANYTSRGPSPSYPGILKPDIMAPGTTVLAAFVPNKPAARIGNNVLLPSGFNFLSGTSMACPHVSAVAALLKASHPEWTPAAIKSALVTTANPLDNTQNPIRDNGNPSRQHASPLAMGAGEIDPNRALDPGLIYDATPQDYINLLCSLGYTHNQILTITRSNSFNCTNPSSDLNYPSFIALYGNKTRSIVNEFRRTVTNVGDGAATYRAKVKSPRGSVVRVSPEKLAFGYKNEKQCYSVVINYTRYKKENVSFGEIVWVEEGGAHRVRSPIVVAPM 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4176g00035 757 MobiDBLite consensus disorder prediction 576 602 - -
Gabi4176g00035 757 Pfam Fibronectin type-III domain 653 754 IPR041469 -
Gabi4176g00035 757 MobiDBLite consensus disorder prediction 576 592 - -
Gabi4176g00035 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 754 IPR045051 -
Gabi4176g00035 757 SUPERFAMILY Subtilisin-like 113 613 IPR036852 GO:0004252|GO:0006508
Gabi4176g00035 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Gabi4176g00035 757 Pfam Subtilase family 136 583 IPR000209 GO:0006508|GO:0008236
Gabi4176g00035 757 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Gabi4176g00035 757 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Gabi4176g00035 757 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Gabi4176g00035 757 FunFam Subtilisin-like protease SBT1.5 138 350 - -
Gabi4176g00035 757 CDD Peptidases_S8_3 111 573 IPR034197 -
Gabi4176g00035 757 Gene3D Peptidase S8/S53 domain 138 622 IPR036852 GO:0004252|GO:0006508
Gabi4176g00035 757 FunFam Subtilisin-like protease SBT1.9 19 113 - -
Gabi4176g00035 757 Gene3D - 626 756 - -
Gabi4176g00035 757 Pfam Peptidase inhibitor I9 28 110 IPR010259 -
Gabi4176g00035 757 CDD PA_subtilisin_like 348 467 - -
Gabi4176g00035 757 Gene3D - 343 474 - -
Gabi4176g00035 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 112 IPR037045 -
Gabi4176g00035 757 ProSiteProfiles Serine proteases, subtilase domain profile. 117 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4176g00035 Gabi-Chr4176 340128 342401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4176g00035 11 755 Subtilisin-like Serine Gene Family AT5G67090 42.373 0.0 550