Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4155g00005 ATGGAATTTCAAGTTGGCGGTAAAGATGGTTGGGTGGTGAAACCTTCCGAAGATTATAATCACTGGGCTCAAAGACATAAGTTTCAAGTTAATGACATTCTATATTTTAAGTACAAGAAAGGGAATGATTCGGTCCTGGTGGTGAAGAAAGAGGATTATATTTCGTGTAACATCAATAATCCCATTCATAAAATGGATGATGAGAATTTAACTTTTCTTTTCGACAGGTCGGGTCTCTTTTTCTTTATTAGTGGCAACATGGACAACTGCAAAAATGGTCAAAAGCTTAAAATTTTTGTCATCGCCGTAAGAGACACACTTCCTCATGCTACACCACCGTCCCAATCATCGGTGAGTGTCCCAAATGGACATGGAGAAGGGGACGGTGGAGGCTGGAGTGGAGGAGTGAACGATAACAATATATGCCCGATATGTTGTCCCGTTGCACATTATTGCACCTGTTGCTAA 468 0.4081 MEFQVGGKDGWVVKPSEDYNHWAQRHKFQVNDILYFKYKKGNDSVLVVKKEDYISCNINNPIHKMDDENLTFLFDRSGLFFFISGNMDNCKNGQKLKIFVIAVRDTLPHATPPSQSSVSVPNGHGEGDGGGWSGGVNDNNICPICCPVAHYCTCC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4155g00005 155 FunFam Early nodulin-like protein 1 1 105 - -
Gabi4155g00005 155 Pfam Plastocyanin-like domain 11 94 IPR003245 GO:0009055
Gabi4155g00005 155 Gene3D - 1 105 IPR008972 -
Gabi4155g00005 155 CDD OsENODL1_like 2 101 IPR041846 -
Gabi4155g00005 155 PANTHER BLUE COPPER PROTEIN 2 100 IPR039391 GO:0009055
Gabi4155g00005 155 ProSiteProfiles Phytocyanin domain profile. 1 102 IPR003245 GO:0009055
Gabi4155g00005 155 SUPERFAMILY Cupredoxins 2 101 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4155g00005 Gabi-Chr4155 23250 23816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4155g00005 2 140 Phytocyanin Superfamily AT4G28365 47.482 5.47e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4155g00005 - - gmx:100778867 172.17