Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4153g00001 ATGCCTGCTGACAATTCTTCAGTTTCTGGCCAAACCGTGTGTGTCACTGGCGCTGGTGGGTTCATAGCTTCTTGGCTCGTCAAAGTTCTCTTAGAGAAAGGCTACACTGTCAAAGGAACCGTGAGAAACCCAGATGATCCGAAGAATGGTCACTTGAAAGAGTTAGAAGGAGCGAGGGAGAGGCTAACTCTGCATAAAGTTGATCTCATTGATGTTGAGTCTATCAAAGCTGTTGTTAATGGTTGCCATGGTGTCTTCCACACGGCCTCACCTGTCACTGATAACCCTGAAGAAATGTTGGAGCCAGCAGTGAAAGGAGCCAAGAATGTGATAAAAGCAGCTGCAGAAGCAAAAGTGAGACGCGTGGTGTTCACTTCATCAATTGGCACAGTGTATATGGACCCCAACAGGAGTACGGATGCGGTGGTTGATGAGTCAAGCTGGAGTGATTTGGAGTACTGCAAGACCACCAAGAACTGGTATTGCTATGGGAAGACCGTGGCTGAACAAGAAGCATGGAATTTAGCAAAAGAGAAAGAGGTGGATTTGGTTGTGGTGAACCCAGTTTTGGTTCTAGGACCATTACTACAACCAACCGTTAATGCTAGTACAATTCACATCCTCAAGTACCTTACTGGCTCTGCTAAGACTTATGTAAATGCAGCTCAGTCTTATGTAGATGTTAGGGATGCAGCATTAGCCCACATTCTTGTTTACGAGACACCACCTGCTTCTGGTCGATACATATGTTCTGAAAGTTCGTTGCACCGTGGTGAGCTAGTTGAAATTCTAGCCAAGTACTTCCCCCAGTACCCTGTTCCTACCAAATGTTCAGATGAAAAGAACCCGAGAGTGAAACCTCATGTGTTTTCAAATAAAAAGCTGAAAGATTTGGGATTGGACTTCACCCCAGTGAAGCAGTGTCTATATGAGACCGTTAAGAGTCTACAGGAGAAAGGGCACCTTCCTGTCCGCATGAAGGCACAATTGTGA 993 0.4562 MPADNSSVSGQTVCVTGAGGFIASWLVKVLLEKGYTVKGTVRNPDDPKNGHLKELEGARERLTLHKVDLIDVESIKAVVNGCHGVFHTASPVTDNPEEMLEPAVKGAKNVIKAAAEAKVRRVVFTSSIGTVYMDPNRSTDAVVDESSWSDLEYCKTTKNWYCYGKTVAEQEAWNLAKEKEVDLVVVNPVLVLGPLLQPTVNASTIHILKYLTGSAKTYVNAAQSYVDVRDAALAHILVYETPPASGRYICSESSLHRGELVEILAKYFPQYPVPTKCSDEKNPRVKPHVFSNKKLKDLGLDFTPVKQCLYETVKSLQEKGHLPVRMKAQL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4153g00001 330 Gene3D - 3 329 - -
Gabi4153g00001 330 CDD FR_SDR_e 13 300 - -
Gabi4153g00001 330 FunFam Cinnamoyl-CoA reductase 1 4 330 - -
Gabi4153g00001 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 317 IPR036291 -
Gabi4153g00001 330 Pfam NAD dependent epimerase/dehydratase family 13 242 IPR001509 -
Gabi4153g00001 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4153g00001 Gabi-Chr4153 10706 19320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4153g00001 8 276 Monolignol Biosynthesis Gene Families AT1G80820 72.862 2.12e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4153g00001 K09753 - gmx:100811528 558.525