Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00067 ATGGTTTTCCCAAAACCACCTTCTGAGTCTGATCTCTTTCTTCACTCTAACTTTGCTTCTCGTTATGCCAGGGACTCTCTTCCTAGGTTCAGCATGCCAGAGAACTCTATGCCTAAGGAGGCAGCGTACCAGAACATACACGATGAGCTTCAGCTTGATGCGAATCCAAAGCTGAACTTGGCTTCCTTTGTCACCACATCCATGGAGGAAGAATGCAACAAGCTCATCATGGAATCCATCAACAAGAACTACGTTGACATGGATGAGTATCCTGTCACCACTGATCTTCACAACCGGTGCGTGAACATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAAACGAGAGTGCAATTGGAGCAGGAACTGTTGGATCATCTGAGGCCATAATGCTGGCAGGCCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGCATGGCTGAGGGCAAGCCCTATGATAAGCCCAACATGGTCACTGGTGCTAATGTCCAGGTATGTTGGGAGAAATTTGCGAGGTATTTTGAGGTGGAATTGAGGGAAGTGAAGGTTAGTGAAGGCTACTACGTGATGGACCCTGCCAAAGCCGTGGAGCTAGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTATAATGGAGAATTCGAAGATGTCAAGCTCTTAAATGACCTGCTCCTAGAAAAAAACAAGCAAACTGGGTGGGATACGCCTATTCATGTTGATGCTGCTAGTGGTGGCTTTATTGCTCCTTTTCTTTATCCAGAGCTAGAATGGGATTTCAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGTCACAAGTATGGGCTTGTTTATGCTGGAATTGGTTGGGTTATATGGAGGACCAAGGAGGATTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAACCCACCTTCACCCTGAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGCCTTGGCCATGAGGGATACCGGAGTATAATGGAGGACTGCAGAGAAAATGCCATGGTTCTGAAGGAAAGCTTGGAGAAAACAGGATGCTTTAACATTCTGTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTAAAGGACAGAAGCTATTACAATGAGTTCAAGATATCAGAGATGTTGCGCCGCCATGGTTGGATTGTGCCAGCTTATCCAATGCCACCTGCTGCACAACACATCAATGTGCTCCGTGTGGTGATCAGAGCTGAATTTTCACGCACACTTGCTGAACGCCTTGTGTTTGACATCAAAAATGTGCTGCACGAGCTTGAAAAACTTCACCCCAAAAACACTGCCAAAGTGAACAACAACAACATTAAGGAAGAGACTGCCATGATTGACAATGGTGTCAAGAAGACTGCATTGGATGCACACAGGGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGCCTAG 1491 0.4507 MVFPKPPSESDLFLHSNFASRYARDSLPRFSMPENSMPKEAAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPVTTDLHNRCVNMIARLFHAEIGENESAIGAGTVGSSEAIMLAGLAFKKKWQNKRMAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVKVSEGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGHEGYRSIMEDCRENAMVLKESLEKTGCFNILSKDNGVPVVAFSLKDRSYYNEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVFDIKNVLHELEKLHPKNTAKVNNNNIKEETAMIDNGVKKTALDAHREIIAQESNKRQKIMAA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00067 496 FunFam Glutamate decarboxylase 4 65 - -
Gabi4152g00067 496 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gabi4152g00067 496 FunFam Glutamate decarboxylase 361 448 - -
Gabi4152g00067 496 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Gabi4152g00067 496 FunFam Glutamate decarboxylase 66 360 - -
Gabi4152g00067 496 Gene3D - 66 360 IPR015421 GO:0003824
Gabi4152g00067 496 Gene3D - 1 65 - -
Gabi4152g00067 496 Gene3D - 361 447 - -
Gabi4152g00067 496 PANTHER GLUTAMATE DECARBOXYLASE 9 490 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gabi4152g00067 496 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00067 Gabi-Chr4152 702888 705438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00067 1 484 Calmodulin-binding Proteins AT5G17330 77.618 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00067 K01580 - gmx:100812201 914.835