Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00043 ATGTCCAACTCACCCTTCTCATTGCTCATTCTTTTGCTTCTTTACACCATTTCAGCCTCGGCACATCCTCCTCAAGATTATGATGTGCCATTCACTTCCTCCCCAGGGGATATTATCTACACTCTCAAAGTGCCAACATTAGAGGAAACCAACTTGGATAATCTCCTATCCTTTGGTTACTACCAAAAAAGTTGTCAGCAATTTGAATCCATCCTGCACAAGAAAGTGATTGAATGGATTCAAAAGGATCACACTTTAGCTGCTAGTCTCCTAAGGTTACATTTCCATGATTGCTCTGTCAGGGGATGTGATGCCTCCATTCTTTTGAACCATGATGGAAGTGAGAGGACATCACAAGTAAGCAAGACACTGAGAGGATTTGAAGTGATTGATGATATCAAGGCAGAGTTGGAGAAGAATTGCCCCAAGACTGTTTCTTGTGCAGACATTCTGACTGCTGCTACTAGGGATGCTACTGTTAAGTTGGGTGGTCTATATTGGGCAGTTCCCTATGGCAGGAAAGATGGGCTGGTTTCCATTGCCAAGGAAGCTGAAATGGTGCCCATGGGTCATGAAAACATTACTTATTTGGTTGAGTTTCTCCAATCCAAGGGCCTGAATGTGCTTGACTTAGTTGTTCTCTCAGGGGCTCATACAATTGGAAGGGCTTCATGTGGATCCATTCAAGATAGGTTATACAACTACCAAGGAACTGGGAAACCAGACCCATCTATAGATCCCAATTACCTCAACTTCTTGCAAAGAAAGTGTAGATGGGCCTCAGAGGTTGTGGATCTTGATGCTACAACGCCAAGGGCCTTTGATCCTGTGTACTACATAAATCTCAAGAAGAAAAAGGGGTTGTTATCAACAGATCAGTTGTTATATTCTGATCCAAGGACTTCTCCCATTGTTTCTGCATTAGCTTCCGCGCCTTACATTTTCAAGCACCAGTTTGCGGTGTCCATGGCAAAGCTTGGTAACATTGAAGTTCTCACGGGCCAGGATGAAGGGGAAATTAGGACCAACTGCAATTTTGTCAATGCTTATTGA 1053 0.434 MSNSPFSLLILLLLYTISASAHPPQDYDVPFTSSPGDIIYTLKVPTLEETNLDNLLSFGYYQKSCQQFESILHKKVIEWIQKDHTLAASLLRLHFHDCSVRGCDASILLNHDGSERTSQVSKTLRGFEVIDDIKAELEKNCPKTVSCADILTAATRDATVKLGGLYWAVPYGRKDGLVSIAKEAEMVPMGHENITYLVEFLQSKGLNVLDLVVLSGAHTIGRASCGSIQDRLYNYQGTGKPDPSIDPNYLNFLQRKCRWASEVVDLDATTPRAFDPVYYINLKKKKGLLSTDQLLYSDPRTSPIVSALASAPYIFKHQFAVSMAKLGNIEVLTGQDEGEIRTNCNFVNAY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00043 350 PRINTS Plant peroxidase signature 89 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 144 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Plant peroxidase signature 65 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 CDD secretory_peroxidase 56 347 IPR033905 GO:0004601|GO:0042744
Gabi4152g00043 350 ProSiteProfiles Plant heme peroxidase family profile. 55 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Gabi4152g00043 350 Gene3D - 59 348 - -
Gabi4152g00043 350 ProSitePatterns Peroxidases active site signature. 87 98 IPR019794 GO:0004601
Gabi4152g00043 350 PRINTS Haem peroxidase superfamily signature 163 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Haem peroxidase superfamily signature 87 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Haem peroxidase superfamily signature 145 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 SUPERFAMILY Heme-dependent peroxidases 56 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 FunFam Peroxidase 59 200 - -
Gabi4152g00043 350 Pfam Peroxidase 74 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 PANTHER PEROXIDASE 25-RELATED 15 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4152g00043 350 Gene3D Peroxidase, domain 2 188 326 - -
Gabi4152g00043 350 FunFam Peroxidase 188 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00043 Gabi-Chr4152 483827 485492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00043 52 349 Peroxidase AT1G30870 61.667 8.26e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00043 K00430 - gmx:100798229 546.199