Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00041 ATGAAATCACTGGCACCATATTCACTTGGGACTTGCCTGACTTCCCTGCAACCCCAAAAGGGTAGTAACTATTCATCACCTCTTCCATTCTCTGCTGTCCAAGTCCAACCACTAGTACTCTTACAAAATGAGACCAACCCAACCACCCAGTTCAAGAGAAGAGATGCAATAGGCCTTTCCTTAAGTTTTGGCCTTCTTCATAATTTCTTGCAATCACAACCCACGTCAGCTTCAGCAGCTGAAGCAGTTCCATGTGAATTAACAGTAGCTCCTTCAGGCCTTGCCTTCTGTGATCAAATTGTGGGAACTGGTCCTCAGGCTCTTAAGGGACAGCTTATTAAGGCACATTACGTTGGGAAATTGGAAAATGGGAAAATTTTCGACAGCAGTTACAATCGTGGCAAGCCACTTACGTTTCGTGTTGGTGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAGTACCTCCCATGCTTGCAGGAGGGAAACGTACATTGAAGCTTCCCCCAGAACTTGGATATGGCTCAAGAGGGGCTGGTTGTAGAGGAGGTTCATGTGCCATTCCTCCTGATTCGGTACTCTTATTCGATGTTGAGTTCATTAGCAAAGCCTGA 630 0.4603 MKSLAPYSLGTCLTSLQPQKGSNYSSPLPFSAVQVQPLVLLQNETNPTTQFKRRDAIGLSLSFGLLHNFLQSQPTSASAAEAVPCELTVAPSGLAFCDQIVGTGPQALKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPPMLAGGKRTLKLPPELGYGSRGAGCRGGSCAIPPDSVLLFDVEFISKA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00041 209 SUPERFAMILY FKBP-like 87 207 - -
Gabi4152g00041 209 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 50 207 IPR044183 GO:0009507
Gabi4152g00041 209 FunFam Peptidylprolyl isomerase 82 208 - -
Gabi4152g00041 209 Gene3D - 81 209 IPR046357 GO:0003755
Gabi4152g00041 209 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 206 IPR001179 GO:0003755
Gabi4152g00041 209 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 110 209 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00041 Gabi-Chr4152 476688 479293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00041 110 207 Calmodulin-binding Proteins AT5G48570 42.857 1.27e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00041 K01802 - gmx:100778390 278.485