Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00036 ATGGGTGCAGGCGATTACTACAAGATCCTCAAGGTGAATCGTAATGCCACGGATGAGGAATTGAAGAAGGCATATAAGAGGTTGGCCATGAAGTGGCACCCAGATAAGAACCATCAACAACACCCAGTTAAGAAAGAAGAAGCTGAGGCCAAGTTCAAACAGATTTCAGAGGCTTATGATGTCCTCAGCGACCCCAAGAAGCGCCAGATCTATGATTTCTATGGCCACTACCCCCTTAACTCTATGAAGGTGAAGAAGGAAAATAGTGATGGGGATGTTAGTATTCTCAAGGATGAGAAATTAGGGGTGGTTGAGAGCAAATTGGTGTGTACCCTTGAGGAACTTTACAAAGGATGCAGAAGGAAGTTGAAGATCTCAAGGGCTGTTCCTGATGAATTTGGCAAGTTGAAGTCTGTGGATGAAATACTGAAGGTAGATATCGAACCTGGATGGAAGAAGGGCACAAAAATAACTTTTCCCGGGAAAGGCAACCAAGAAGCAGGAACTAGTCCTTCTGATCTGATCTTTGTGGTGGATGAGAAACCACATGCTTTTTTCAAAAGGGATGGAAATGATTTGGTAGTCACTCAGAAAATCTTACTTCAAGAGGCTCTCATAGGAAAGACTCTCCACTTGACAACCTTGGATGGAAGAGACCTCACAATTCAAGTGACAGATGTTGTGAAACCTGGCTATGTGTTGGCGGTACCAAATGAAGGAATGCCCATTTCAAAGGAACCTGGCAAGAAAGGAAACTTAAGAATCAAGTTTGATGTCATGTTCCCATCAAGGCTTACCACACAACAGAAGTATGAGCTGAAAAGGATTCTGAGCAATTCTGATATCTAA 849 0.4299 MGAGDYYKILKVNRNATDEELKKAYKRLAMKWHPDKNHQQHPVKKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSMKVKKENSDGDVSILKDEKLGVVESKLVCTLEELYKGCRRKLKISRAVPDEFGKLKSVDEILKVDIEPGWKKGTKITFPGKGNQEAGTSPSDLIFVVDEKPHAFFKRDGNDLVVTQKILLQEALIGKTLHLTTLDGRDLTIQVTDVVKPGYVLAVPNEGMPISKEPGKKGNLRIKFDVMFPSRLTTQQKYELKRILSNSDI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00036 282 PRINTS DnaJ domain signature 47 67 IPR001623 -
Gabi4152g00036 282 PRINTS DnaJ domain signature 25 40 IPR001623 -
Gabi4152g00036 282 PRINTS DnaJ domain signature 7 25 IPR001623 -
Gabi4152g00036 282 PRINTS DnaJ domain signature 67 86 IPR001623 -
Gabi4152g00036 282 SUPERFAMILY Chaperone J-domain 4 80 IPR036869 -
Gabi4152g00036 282 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Gabi4152g00036 282 FunFam DNAJ heat shock family protein 182 277 - -
Gabi4152g00036 282 Gene3D DnaJ domain 2 96 IPR036869 -
Gabi4152g00036 282 Pfam DnaJ domain 5 72 IPR001623 -
Gabi4152g00036 282 CDD DnaJ 5 64 IPR001623 -
Gabi4152g00036 282 Gene3D - 183 263 - -
Gabi4152g00036 282 Gene3D - 102 181 - -
Gabi4152g00036 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 270 IPR008971 GO:0006457|GO:0051082
Gabi4152g00036 282 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Gabi4152g00036 282 SMART dnaj_3 4 67 IPR001623 -
Gabi4152g00036 282 Pfam DnaJ C terminal domain 104 262 IPR002939 -
Gabi4152g00036 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 106 183 IPR008971 GO:0006457|GO:0051082
Gabi4152g00036 282 CDD DnaJ_C 104 265 - -
Gabi4152g00036 282 FunFam Dnaj homolog subfamily b member 97 181 - -
Gabi4152g00036 282 FunFam DnaJ-like subfamily B member 13 2 97 - -
Gabi4152g00036 282 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00036 Gabi-Chr4152 392770 395123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00036 6 74 C2H2 Transcription Factor Family AT1G74250 37.681 3.18e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00036 K09510 - gmx:100786068 490.345