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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gabi4152g00030
ATGGCGGGTTCAAACATGACAGTTCTAATCCAAAACGAAAGGCATCCATGCTCCTCGGAGCTAGTTGAGTCTTTCTTGGTTCAAAGTTCTGAACCTTTCTTTCAAGGTTCAGAATCCCTGGTTAATGTTGTGAATGTTAGTGGGAGCAGAGTCACAGATAGGTCCTTCTTCAAAGCGGTTGAGAAAGAAGAGAAGGGTGATGATGAGGACTACGAGGCATGCTTCCATCAACCCGGTAAGAAAAGGAGGCTAACAAGCGAACAAGTTCAGTTCCTTGAAAGAAACTTTGAGGTAGAAAACAAGCTTGAACCCGAAAGGAAGGTCCAACTTGCAAAGGAGCTTGGCTTGCAGCCTAGGCAAGTGGCCATATGGTTCCAAAACCGGAGGGCAAGGTTCAAAACCAAACAACTAGAAAAAGACTATGCCACATTGAAAGCTAGTTATGACATACTCAAAGGTGACTATGACAATATTTTTCAAGAAAGGGAGAAGTTAAAAGAAGAGGTTAATTCTCTCAAGAACAGAATGATTGCAAGAGAGAAAAAGGAACAGAATTTAGATGTTAAGTCCTGTTGTGGTGCTGTCAAGTCAAAGCATAAAGAGGATATGGATTTAATCTTAAATGCAGCTTCTGAAAATGGGTTCAAAGTGCCACTTCCTGTTATGGTCATGTGCAAACTTGAAGATGCCAATTCAGCTAAAAGTGATGTGCATGATTCGGAACAAGACCAGTCTGATTTCTCACAAGATGAACAAGACATTCAAAGGGAAAACCTCTTCACCGTGCCATCCTTACCAAAGGACGAAGATGGCTGTTATGATGAACCACCTGAAAATTGTTGCAGTTTTCGGTTTCCAATTGAAGATCAAACCTTCTGTTTTTGGTCTTACTGA
894
0.4139
MAGSNMTVLIQNERHPCSSELVESFLVQSSEPFFQGSESLVNVVNVSGSRVTDRSFFKAVEKEEKGDDEDYEACFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYATLKASYDILKGDYDNIFQEREKLKEEVNSLKNRMIAREKKEQNLDVKSCCGAVKSKHKEDMDLILNAASENGFKVPLPVMVMCKLEDANSAKSDVHDSEQDQSDFSQDEQDIQRENLFTVPSLPKDEDGCYDEPPENCCSFRFPIEDQTFCFWSY
297
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gabi4152g00030
297
ProSitePatterns
'Homeobox' domain signature.
110
133
IPR017970
GO:0000981|GO:0006355
Gabi4152g00030
297
Coils
Coil
148
182
-
-
Gabi4152g00030
297
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN
57
240
IPR045224
GO:0003700
Gabi4152g00030
297
Pfam
Homeodomain
80
133
IPR001356
GO:0003677
Gabi4152g00030
297
Gene3D
-
73
142
-
-
Gabi4152g00030
297
CDD
homeodomain
78
136
IPR001356
GO:0003677
Gabi4152g00030
297
PRINTS
Lambda-repressor HTH signature
115
131
IPR000047
GO:0003677
Gabi4152g00030
297
PRINTS
Lambda-repressor HTH signature
106
115
IPR000047
GO:0003677
Gabi4152g00030
297
Pfam
Homeobox associated leucine zipper
135
176
IPR003106
GO:0006355|GO:0043565
Gabi4152g00030
297
FunFam
Homeobox-leucine zipper protein HAT5
73
137
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gabi4152g00030
Gabi-Chr4152
273250
275028
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gabi4152g00030
16
180
Homeobox Transcription Factor Family
AT3G01470
48.503
2.66e-42
145
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Gabi4152g00030
Homeodomain
3.3e-16
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gabi4152g00030
-
K09338
gmx:100804328
379.407
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