Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00014 ATGTTGGATTTGCAGTTGAAGCTACACTCACTACCATCACTATCATCTTCATCTTCTTCTTCTTCTTCTTCACTTAAGCAGTGCCCAAACCACTCTTTCTCTCCAAAGTCTTTTCCTTTCAACCCTTCTTCTGAACCCCTCACAGTCACCAAACCAATCAGATGCCGCCACTCAGAACTCTTTGATCAGAAAACCTTTTCCTCCACACCACAAGCTGCAACCTCGACTGCTTCAGTTGGAGCTTTGCCACCTAGGGTTTATGTTGGTCACACCATTTACAAAGGGAAGGCTGCACTCTCAGTGACTCCTAGACCCCCGGATTTCGCCCCACTCGATTCAGGGGCATTCAAAATATCTAGGGAAGGTTATGTGCTGCTTCAGTTTGCGCCTGCTGTTGCTTCCCGTCAATATGATTGGAATAGAAAACAGGTGTTCTCGTTATCAGTAGGTGAAATGGGAAGTGTGATTAGCCTTGGAACAAGGGAGTCTTGTGAATTTTTTCATGATCCTTTGAAGGGAAAAAGTGATGAAGGTAAAGTCAGGAAAGTTTTGAAGCTAGAGCCTCTTCCGGACAGTTCCGGTCACTTCTTTAACCTCAGTGTTCAAAACAAGCTTCTGAACATGGATGAAAGCATCATTATCCCTATTACAAAAGCAGAGTTAGCAGTTTTGAGCTCTATTTTCAATTTTATTATGCCATATCTTCTAGGTTGGCATACATTTGCAAACTCCATAAAGCCAGAGGATGCCAGCTTAGTCAATAATGCCAACCCAAGATTCGGAGGTGACTATGAATGGAACAGATAG 807 0.4337 MLDLQLKLHSLPSLSSSSSSSSSSLKQCPNHSFSPKSFPFNPSSEPLTVTKPIRCRHSELFDQKTFSSTPQAATSTASVGALPPRVYVGHTIYKGKAALSVTPRPPDFAPLDSGAFKISREGYVLLQFAPAVASRQYDWNRKQVFSLSVGEMGSVISLGTRESCEFFHDPLKGKSDEGKVRKVLKLEPLPDSSGHFFNLSVQNKLLNMDESIIIPITKAELAVLSSIFNFIMPYLLGWHTFANSIKPEDASLVNNANPRFGGDYEWNR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00014 268 SUPERFAMILY ssDNA-binding transcriptional regulator domain 84 268 IPR009044 GO:0003677|GO:0006355
Gabi4152g00014 268 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 77 252 - -
Gabi4152g00014 268 Gene3D Transcriptional Coactivator Pc4; Chain A 76 249 IPR009044 GO:0003677|GO:0006355
Gabi4152g00014 268 Pfam Whirly transcription factor 92 226 IPR013742 GO:0003697|GO:0006355|GO:0006952
Gabi4152g00014 268 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 37 268 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00014 Gabi-Chr4152 128442 131911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00014 21 268 Whirly Transcription Factor Family AT1G14410 60.887 1.69e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Gabi4152g00014 Whirly 1.2e-58 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00014 K26559 - gmx:100789252 381.719