Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00009 ATGAAGAAATTTTGGGTTTCTTTCTACTACTTGTTTCCTGCAATCATTCTTGTTCTATTTACTCCTACTTCAATTGCACAGCTAACACCAAGTGAGAATAGAATTATTTTCCAAGTTCAAAAACTTCTTCAATATCCTCAAGTTCTTCAAGGATGGACAAACTGGACCAACTTCTGCTTCCTCCCTCCATCACCTTCCCTTAAGATAGTGTGTTCAAATGGTCATGTGACAGAATTAACTATTGTTGGAAACAAGAGCTCCCCATCTTCACACAGCCCCATAACAGCTTCTTTGAATTCCATTCAAACTCTTTCAGCAAGCTTCTCCATTGATTCTTTATTTACTGTCATGACAAAGCTTTCAAATTTAAAGGTGTTGTCATTGGTGTCCTTGGGCTTGTGGGGTCCTTTACCAGCCAAGATCAACCGGTTCTGGTCTATGGAAGTGCTAAACATTAGCTCAAATTTCATTCATGGAGAAATCCCATCATCAATATCATCAATGAAGAATCTGAGGAGTCTGGTGTTGGCTGATAATCTCTTCAATGGAAGTGTCCCAGATCTCACAAGGCTAACTTCTCTTGAAGAGCTCAATTTGGGTGGTAACAAACTTGGTCCTGAATTCCCTTCTGTGGAAAACAATCTTGTGAGTATTATCTTGAGAAAGAATTCTCTGAGATATCAGATTCCTCCCCAACTAATGCACTTTGATAAACTTCAGATATTTGACATCTCTTCCAATGAAATGTTTGGAAATATCCCAACCTCTCTCTTCTCTCTTCCTTCCCTCCAGTACCTAAACTTGGCTACAAACCATCTAAGAGGTAACCTCTCAGTGAATATAGCTTGTAGTTCTGCACTAACATATGTGGATATCTCAAGCAACCTTCTGCAAGGAAAATTACCATCCTGCCTTGGTTCATTGTCTTCAAAGGCCAAGGTACTATATTCTGGGAATTGTTTGTCAACAACCAGAAAGTTAAATGATCAACAACATCCATCTTCATATTGCAAGAAAGAAGCAGCCTTAGCTGTTAAGCCTCCTCAAGCTAAAATGGCGAAGAAGGAATCAGGTATGGAACTAGGCCTAGTACTTGGTATAATTGGAGGGGTTGTTGGAATTGCAGCACTTCTGGCTCTACTCATTGCGTTCATCTTGAGGAAGTCCAAAGCAGAAAGATTAGATCATAAGATTCACAGATCTGTTGCTGATAAATTTTCTGCCCGTGCTTCTTCAAGACCAAATATTGATGCAAGACGTGTTCCTCAGACAATGAGGCTAGCTGCAGTTGGACTGCCACCATACTGTATTTTCACATCAGAGGAAATTGAAGATGCAACAAACAACTTTGACCCATCAAATTTAATAGGAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTAGTTAATTGTATAAAAATAAAGCAAAAGGGTTTGCCCCGCAGCATTATGCAGCACCTAGAGGTATTACCCAATTTGAGACATAGGCATATAGTGAGTGTTCTAGGACACTGTGTAATTACTCACCAGGACCCTCCCCAAACAACAAGCACAGTCTTCGTTGTATTTGAACACGTCTCAAATGTTTCATTAAGGGATCAACTTACAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAGAGAATGGCAATCAGCATAGGCATTGCAAGAGGAATCCATTTCTTACACACAGGAGTTGCTCCTGCCATATTTGGCAACAATTTGAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAAATACAGCATTCCTTTGCCATCCAAGGTTAGAACACACTACCCCATATGCAGCACAAATAATGCAGAAAAGGAAGATATCTACCAGCTTGGTGTTATTCTACTTGAAATTATCACTGGCAAACAAATTACATCCTCTAGTGAAGTAGAGGAGCTGAAGGATGAGCTGGAGAAAGGTTCATCAGAAGCAGCATCAATACTAAGAAGTGCTATTGATCCTTCCCTGAGAGGAACTTATGCATATGAATCAATGAAGACTGCAGTTCAGATTACAATGAATTGTCTATACAAGGTTTCTAGTAATCGGCCTTCAATAGAGGATGTTCTGTGGAATTTACAGTACTCAATGCAAGTTCAAGAGTCGTGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2199 0.4011 MKKFWVSFYYLFPAIILVLFTPTSIAQLTPSENRIIFQVQKLLQYPQVLQGWTNWTNFCFLPPSPSLKIVCSNGHVTELTIVGNKSSPSSHSPITASLNSIQTLSASFSIDSLFTVMTKLSNLKVLSLVSLGLWGPLPAKINRFWSMEVLNISSNFIHGEIPSSISSMKNLRSLVLADNLFNGSVPDLTRLTSLEELNLGGNKLGPEFPSVENNLVSIILRKNSLRYQIPPQLMHFDKLQIFDISSNEMFGNIPTSLFSLPSLQYLNLATNHLRGNLSVNIACSSALTYVDISSNLLQGKLPSCLGSLSSKAKVLYSGNCLSTTRKLNDQQHPSSYCKKEAALAVKPPQAKMAKKESGMELGLVLGIIGGVVGIAALLALLIAFILRKSKAERLDHKIHRSVADKFSARASSRPNIDARRVPQTMRLAAVGLPPYCIFTSEEIEDATNNFDPSNLIGEGSQGQLYKGWLRDGSVVLVNCIKIKQKGLPRSIMQHLEVLPNLRHRHIVSVLGHCVITHQDPPQTTSTVFVVFEHVSNVSLRDQLTDGRKREMLKWPQRMAISIGIARGIHFLHTGVAPAIFGNNLKIENILLDDSLNAKVSKYSIPLPSKVRTHYPICSTNNAEKEDIYQLGVILLEIITGKQITSSSEVEELKDELEKGSSEAASILRSAIDPSLRGTYAYESMKTAVQITMNCLYKVSSNRPSIEDVLWNLQYSMQVQESWTSSGNLSTKL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00009 732 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 423 523 - -
Gabi4152g00009 732 SUPERFAMILY L domain-like 54 324 - -
Gabi4152g00009 732 Gene3D Ribonuclease Inhibitor 215 343 IPR032675 -
Gabi4152g00009 732 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 366 721 - -
Gabi4152g00009 732 Gene3D Transferase(Phosphotransferase) domain 1 534 727 - -
Gabi4152g00009 732 Gene3D Phosphorylase Kinase; domain 1 417 519 - -
Gabi4152g00009 732 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 728 - -
Gabi4152g00009 732 Pfam Protein tyrosine and serine/threonine kinase 454 603 IPR001245 GO:0004672|GO:0006468
Gabi4152g00009 732 Gene3D Ribonuclease Inhibitor 29 214 IPR032675 -
Gabi4152g00009 732 SUPERFAMILY Protein kinase-like (PK-like) 430 712 IPR011009 -
Gabi4152g00009 732 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 213 - -
Gabi4152g00009 732 ProSiteProfiles Protein kinase domain profile. 450 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00009 Gabi-Chr4152 88443 91812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00009 24 668 Miscellaneous Gene Families AT2G02780 50.597 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gabi4152g00009 PK_Tyr_Ser-Thr 7.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00009 - - gmx:100803061 1099.35