Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4152g00003 ATGATTAGGGAGCCTATTGGACCTTCTGCTACCAAGTCATTCTTGTTAATGATTTTTCACTTGGTTTCCTCATCAGAGAATAAAGACTTAATCTCACAAAGATTTGTGGAATTGGGTTTGGCTTCGCTCGTGCTTGAGGCTATTGTTGATCCTGAAAGAGGTATTTGCGAGAAAGGTTTGGGGGTGTTGGATTGCATTTGTGAGGGAAAACAAGGGATGGAAATAGCAAAGTCAAATGCTTTGACTTTGCCTCTTGTGATTAAGAAGCTTTTGAGGGTGTCAGAGTTGAGTTCTACTTTTGCAGTCTCTATTCTTTGGAAGCTATGTGACAAGACCGACGAAGGGATCTTGATTGAGGCACTTCAAGTGGGTGTCTTTCATAAACTCCTTGTTCTGTTGCAGGTGGGTTGTGGTGAGGACACAAAGGAGAAGGCTACCGAGTTGTTGATGTTGTTGAATTGTTACAGGAGCAAAGCAGATTGTGTTGATTCCTCATTGGATTTCATGCACCTCAAGAAGCCCTTCTGA 528 0.4242 MIREPIGPSATKSFLLMIFHLVSSSENKDLISQRFVELGLASLVLEAIVDPERGICEKGLGVLDCICEGKQGMEIAKSNALTLPLVIKKLLRVSELSSTFAVSILWKLCDKTDEGILIEALQVGVFHKLLVLLQVGCGEDTKEKATELLMLLNCYRSKADCVDSSLDFMHLKKPF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4152g00003 175 Gene3D - 7 165 IPR011989 -
Gabi4152g00003 175 SUPERFAMILY ARM repeat 29 155 IPR016024 -
Gabi4152g00003 175 PANTHER WDSAM1 PROTEIN 5 162 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4152g00003 Gabi-Chr4152 44764 45291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4152g00003 15 175 U-box Gene Family AT1G66160 44.848 9.30e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4152g00003 - - gmx:100795913 254.603