Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00083 ATGGGAACTGGAGAAGAAAGCACGGCTAAACCTTCTAAACCAACTTCTTCTACTCAGATACCGTTGGCACCTTCGTCATATCCTGATTGGTCAAGCTCCATGCAGGCTTATTATGCTCCTGGAGCCACTCCCCCTCCTTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCACACCCTTATTTGTGGGGAAGCCAGCATCCTCTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATGTATCCTCCTGGGAGTGTCTATGCTCATCCTAGCATGGCAGCGACTCCAAGCGCCATACAGCATGGTGCAGAGTTTGTAGACAAGGGACCTAATGAAAAAAATGGGGTTGCTGCTAAAAATCTGAAGGGAACAGCTAGAAATACTGGTTCCAAAGCAGGAGACAATGGAAAGGCACGCTCAGGGTCAGGAAATGATGGAATCTCACAAAGCTCTGAAAGTGGATCAGAGGGATCTTCAGATGCCAGTGATGAGAATTCTAACCAACAGGAATCAGCTACAAACAAGAAGGGGAGCTTTGACCAAATGTTTGTTGATGGAGCCAATGCACAGAACAATTCTGTGGGTGGAATTTCTCAATCTTCCACGCCTGGAAAGCCTGTTGTGTCAATGTCTGCAAGTAATCTTAATATTGGAATGGACTTATGGAATGCATCTCCTGCTGGTGTTGAAGCTGCAAAAATGAGACATAATCAATCTGCTGCCTCGGGAAATGTTGCTCCTTCAACCATAATGGGACGTGAAGTCGCACTTGGTGAACAGTGGATACAAGACGAACGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAACAGAGAATCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGATTCACTGGGAAATGAGAATCGAAATCTGAGAGAAGAGCTTCAGAGAGTATCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCTATCAAGGAAGAGTTGGAACGATTGTGTGGGCCAGAAGCTGTTGCTAACATTGAATAA 1047 0.4518 MGTGEESTAKPSKPTSSTQIPLAPSSYPDWSSSMQAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAMYPPGSVYAHPSMAATPSAIQHGAEFVDKGPNEKNGVAAKNLKGTARNTGSKAGDNGKARSGSGNDGISQSSESGSEGSSDASDENSNQQESATNKKGSFDQMFVDGANAQNNSVGGISQSSTPGKPVVSMSASNLNIGMDLWNASPAGVEAAKMRHNQSAASGNVAPSTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVDSLGNENRNLREELQRVSEECEKLTSENNSIKEELERLCGPEAVANIE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00083 348 Coils Coil 279 334 - -
Gabi4147g00083 348 MobiDBLite consensus disorder prediction 268 293 - -
Gabi4147g00083 348 MobiDBLite consensus disorder prediction 1 27 - -
Gabi4147g00083 348 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Gabi4147g00083 348 Gene3D - 269 323 - -
Gabi4147g00083 348 MobiDBLite consensus disorder prediction 104 210 - -
Gabi4147g00083 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 268 331 IPR004827 GO:0003700|GO:0006355
Gabi4147g00083 348 SUPERFAMILY Leucine zipper domain 269 325 IPR046347 GO:0003700|GO:0006355
Gabi4147g00083 348 MobiDBLite consensus disorder prediction 122 210 - -
Gabi4147g00083 348 CDD bZIP_plant_GBF1 271 321 IPR045314 GO:0003700|GO:0006355
Gabi4147g00083 348 Pfam bZIP transcription factor 266 328 IPR004827 GO:0003700|GO:0006355
Gabi4147g00083 348 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 344 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi4147g00083 348 FunFam BZIP transcription factor 268 319 - -
Gabi4147g00083 348 SMART brlzneu 266 330 IPR004827 GO:0003700|GO:0006355
Gabi4147g00083 348 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 273 288 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00083 Gabi-Chr4147 697069 702971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00083 1 348 bZIP Transcription Factor Family AT4G36730 53.429 4.06e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4147g00083 MFMR 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00083 K09060 - gmx:100808533 531.946