Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00080 ATGAGAGTTCCCGTTTCGTCATCCCCACAGGCCAATCCAAAACCCAATAACGCTACCCGTACCATTGCCCTTCACAGTCACACCCCTCCCAATCTCAACAATACCTACGAGCCCACTTCTGTCCTTGACCTCTGTCGCAGCCCCACCACCGTCCCCCCCGAAAACCCCACCCATCACACCCGAGACCGAGAGTGTGTGGAAGTACTTGACGACCATGTTTTGCATGATTTGGATTGGGATTCCATCATGAAGGACTTGAGCTTCCACGACGAATCCAAGACTACCATTCTCCAACCCAATAATATTAACCCATGCGACCTCTCTGTCGGCCCTGACTTCCCACCCTTCGATCACGCCGCAGAATTCACCACTCTCTCCGACATGTACTCGAACCATAACCTGGGTAATTACAACCTCACCACCCTCGACCATTCCGTTCACGATTTCAACGGCTTCGATTTCATCGAAGAGCTTATCCGTGCGGCCGATTGCTTCGACAACAACCAGCTACAACTTGCGCCCGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCCGTGGGAAAGCCACTCCACCGAGCAGCGTTTTACTTCAAAGAAGCTCTCCAGTCCCTTCTCTCCGGTTCGAACCGGACCCCGCGGCTTTCTTCCTTGGTTGAAATCGTGCATAGCATCAGAACCTTCAAGGCCTTCTCTGGAATCTCGCCGATCCCAATGTTCTCTATCTTCACCACCAACCAAGCCCTCCTTGAAGCCCTTCACGTTCATGCCACCACCTTTATGCACGTCATCGACTTTGACATAGGCCTCGGTATTCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGCTGAGTCATGCAAAATCACCTCCCCGCCGATCCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCACGCTCGTCCGCCAGAACCTCACCCAATTCGCTCAAGAACTCAGAATCCAAGTCCAGGTTGAATTCGTGCTTCTCAGGACGTTCGAGACGCTGTCGTTTAAGGCCGTCAAGTTCCTCGACGGAGAGAAGACCGCCGTCCTCTTATCTCCGGCCATCTTCCGCCGCCTCGTCTCCGCCGCTGCCTTCCTTGCCGACGTACGTAGGGTCTCGCCCAGCGTGGTGGTTTTTGTGGACTCGGAAGGGTGGGCGGAGGCCGCGGCAGCGTCGTCCTTCCGGCGAGGCGTGGTTAGTAGCCTGGAGTTCTATTCGATGATGCTGGAGTCGCTGGATGCGACGATGGTAGGGGGAGCAGGTGAATGGGTGAGGAGAATTGAGATGCTTCTGCTGCGCCCGAAGATTTTGGCGGCGGTGGAGGGTGCCGGGCGGCGGGTGACGCCGTGGAGGGAGGCGTTTTACGGGGCCGGAATGAGGCCTGTGCAGTTAAGCCAGTTCGCGGATTTTCAAGCGGAATGTTTGTTGGCCAAGGTACAAATCAGAGGCTTCCACGTGGCCAAACGCCAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGGGCCATGGTTGTCACGTCAGCATGGCACTGTTAG 1557 0.5581 MRVPVSSSPQANPKPNNATRTIALHSHTPPNLNNTYEPTSVLDLCRSPTTVPPENPTHHTRDRECVEVLDDHVLHDLDWDSIMKDLSFHDESKTTILQPNNINPCDLSVGPDFPPFDHAAEFTTLSDMYSNHNLGNYNLTTLDHSVHDFNGFDFIEELIRAADCFDNNQLQLAPVILERLNQRLRSPVGKPLHRAAFYFKEALQSLLSGSNRTPRLSSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQALLEALHVHATTFMHVIDFDIGLGIQYASLMKEIAEKAESCKITSPPILRITAVVPEEYAVESTLVRQNLTQFAQELRIQVQVEFVLLRTFETLSFKAVKFLDGEKTAVLLSPAIFRRLVSAAAFLADVRRVSPSVVVFVDSEGWAEAAAASSFRRGVVSSLEFYSMMLESLDATMVGGAGEWVRRIEMLLLRPKILAAVEGAGRRVTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVVTSAWHC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00080 518 ProSiteProfiles GRAS family profile. 145 517 IPR005202 -
Gabi4147g00080 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 511 IPR005202 -
Gabi4147g00080 518 MobiDBLite consensus disorder prediction 1 38 - -
Gabi4147g00080 518 Pfam GRAS domain family 155 516 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00080 Gabi-Chr4147 672787 674830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00080 69 517 GRAS Transcription Factor Family AT4G36710 56.838 2.48e-172 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4147g00080 GRAS 6.2e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00080 - - gmx:100807470 693.73