Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00045 ATGTCTGAGACACACCCAACTTTGTGTACTCTTTCATCCATTCTTGCTCTTCTTCTAATCTTCCTTCTCATCAAAAGAAAGCAAGCCAGACCCAGGCTTAATCTTCCCCCAGGAAAAATGGGCTGGCCCTTTGTGGGGGAAACCATTGGGTATTTGAAGCCTTACTCTGCTACTACAATTGGAGACTTTATGGAGCAGCACATAGCAAGGTACGGTAAAATTTATAAGTCGAAATTGTTTGGTGAGCCAGCAATAGTTTCGGCAGATGCAGGGTTGAATAGGTTCATATTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTACCCTAGAAGCATTGGTGGAATACTCGGAAAATGGTCCATGTTAGTGTTAGTTGGCGACATGCATAGGGACATGCGGGTTATATCACTCAACTTTCTAAGCCATGCCAGGCTCAGAACACATCTCTTGAAAGAGGTAGAGAAGCATACCCTTCTGGTTCTAAGCTCTTGGAAGGATAATTCCACATTCTCAGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCAAAGCATATCATGAGTCTGGATCCTGGGAATATGGAGACAGAGGAACTAAAGAAAGAGTATATCACTTTCATGAAAGGGGTGGTATCGGCTCCATTGAATTTTCCTGGAACTGCATACTGGAAGGCATTAAAGTCCAGGTCCACCATACTAAAGTTCATAGAGGGGAAAATGGAAGAAAGAGTCAAAAGAATCCAAGAGGGAAATGAGAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTCTGAAGCATTCAAATCTTTCAACCGAACAAATTCTTGACTTGATCCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCCGGTTGTCCTCAAGCTATGAAGCAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAACTGACTTGGGATGATTACAAACGAATGGAATTTACTCACTGCGTTGTGAACGAGACACTTCGGCTGGGAAATGTTGTTAGGTTCCTTCACAGGAAGGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACGAACCTCAACACTTCAATCCATGGAGATGGCAGTTTCTAGTCTCAGCTCATTCAGCTTCTTCTAACTCTACGAACAGTGGTAGTCTTGGAAGTTGCCCAAGTTCGAGCACAGCAAGCAGTAACTTCTTACCGTTCGGGGGAGGACCAAGACTATGCGCGGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATTCTCAATTACCATTGGGAATTGGCTGATACCGATGAAGCTTTTGCATACCCTTTTGTTGATTTTCCAAAAGGCCTATCTATCAGAGTCCAAACCCACTCTTTGATTTGA 1503 0.4405 MSETHPTLCTLSSILALLLIFLLIKRKQARPRLNLPPGKMGWPFVGETIGYLKPYSATTIGDFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWKDNSTFSAQDEAKKFTFNLMAKHIMSLDPGNMETEELKKEYITFMKGVVSAPLNFPGTAYWKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMKQLREEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDEPQHFNPWRWQFLVSAHSASSNSTNSGSLGSCPSSSTASSNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDEAFAYPFVDFPKGLSIRVQTHSLI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00045 500 Gene3D Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 Coils Coil 305 332 - -
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 447 465 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS E-class P450 group IV signature 431 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 Coils Coil 239 259 - -
Gabi4147g00045 500 SUPERFAMILY Cytochrome P450 32 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 FunFam Cytochrome P450 90B1 25 496 - -
Gabi4147g00045 500 Pfam Cytochrome P450 36 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gabi4147g00045 500 PANTHER CYTOCHROME P450 26 31 475 - -
Gabi4147g00045 500 CDD CYP90-like 67 494 - -
Gabi4147g00045 500 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00045 500 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00045 Gabi-Chr4147 441301 445389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00045 25 406 Cytochrome P450 AT3G50660 76.675 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00045 K09587 - gmx:100789515 868.996