Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00044 ATGTCTGAGACACACCCAACTTTGTGTACTCTTTCATCCATTCTTGCTCTTCTTCTAATCTTCCTTCTCATCAAAAGAAAGCAAGCCAGACCCAGGCTTAATCTTCCCCCAGGAAAAATGGGCTGGCCCTTTGTGGGGGAAACCATTGGGTATTTGAAGCCTTACTCTGCTACTACAATTGGAGACTTTATGGAGCAGCACATAGCAAGGTACGGTAAAATTTATAAGTCGAAATTGTTTGGTGAGCCAGCAATAGTTTCGGCAGATGCAGGGTTGAATAGGTTCATATTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTACCCTAGAAGCATTGGTGGAATACTCGGAAAATGGTCCATGTTAGTGTTAGTTGGCGACATGCATAGGGACATGCGGGTTATATCACTCAACTTTCTAAGCCATGCCAGGCTCAGAACACATCTCTTGAAAGAGGTAGAGAAGCATACCCTTCTGGTTCTAAGCTCTTGGAAGGATAATTCCACATTCTCAGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCAAAGCATATCATGAGTCTGGATCCTGGGAATATGGAGACAGAGGAACTAAAGAAAGAGTATATCACTTTCATGAAAGGGGTGGTATCGGCTCCATTGAATTTTCCTGGAACTGCATACTGGAAGGCATTAAAGTCCAGGTCCACCATACTAAAGTTCATAGAGGGGAAAATGGAAGAAAGAGTCAAAAGAATCCAAGAGGGAAATGAGAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTCTGAAGCATTCAAATCTTTCAACCGAACAAATTCTTGACTTGATCCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCCGGTTGTCCTCAAGCTATGAAGCAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAACTGACTTGGGATGATTACAAACGAATGGAATTTACTCACTGCGTTGTGAACGAGACACTTCGGCTGGGAAATGTTGTTAGGTTCCTTCACAGGAAGGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACGAACCTCAACACTTCAATCCATGGAGATGGCAGACCCAACATAACAACAGTGGTAGTCTTGGAAGTTGCCCAAGTTCGAGCACAGCAAGCAGTAACTTCTTACCGTTCGGGGGAGGACCAAGACTATGCGCGGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATTCTCAATTACCATTGGGAATTGGCTGATACCGATGAAGCTTTTGCATACCCTTTTGTTGATTTTCCAAAAGGCCTATCTATCAGAGTCCAAACCCACTCTTTGATTTGA 1476 0.4411 MSETHPTLCTLSSILALLLIFLLIKRKQARPRLNLPPGKMGWPFVGETIGYLKPYSATTIGDFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWKDNSTFSAQDEAKKFTFNLMAKHIMSLDPGNMETEELKKEYITFMKGVVSAPLNFPGTAYWKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMKQLREEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDEPQHFNPWRWQTQHNNSGSLGSCPSSSTASSNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDEAFAYPFVDFPKGLSIRVQTHSLI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00044 491 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 Pfam Cytochrome P450 36 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 Coils Coil 305 332 - -
Gabi4147g00044 491 Coils Coil 239 259 - -
Gabi4147g00044 491 FunFam Cytochrome P450 90B1 25 487 - -
Gabi4147g00044 491 CDD CYP90-like 67 485 - -
Gabi4147g00044 491 Gene3D Cytochrome P450 24 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 PANTHER CYTOCHROME P450 26 31 466 - -
Gabi4147g00044 491 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00044 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00044 Gabi-Chr4147 441301 445389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00044 25 406 Cytochrome P450 AT3G50660 76.675 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00044 K09587 - gmx:100789515 873.233