Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00043 ATGTCTGAGACACACCCAACTTTGTGTACTCTTTCATCCATTCTTGCTCTTCTTCTAATCTTCCTTCTCATCAAAAGAAAGCAAGCCAGACCCAGGCTTAATCTTCCCCCAGGAAAAATGGGCTGGCCCTTTGTGGGGGAAACCATTGGGTATTTGAAGCCTTACTCTGCTACTACAATTGGAGACTTTATGGAGCAGCACATAGCAAGGTACGGTAAAATTTATAAGTCGAAATTGTTTGGTGAGCCAGCAATAGTTTCGGCAGATGCAGGGTTGAATAGGTTCATATTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTACCCTAGAAGCATTGGTGGAATACTCGGAAAATGGTCCATGTTAGTGTTAGTTGGCGACATGCATAGGGACATGCGGGTTATATCACTCAACTTTCTAAGCCATGCCAGGCTCAGAACACATCTCTTGAAAGAGGTAGAGAAGCATACCCTTCTGGTTCTAAGCTCTTGGAAGGATAATTCCACATTCTCAGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCAAAGCATATCATGAGTCTGGATCCTGGGAATATGGAGACAGAGGAACTAAAGAAAGAGTATATCACTTTCATGAAAGGGGTGGTATCGGCTCCATTGAATTTTCCTGGAACTGCATACTGGAAGGCATTAAAGTCCAGGTCCACCATACTAAAGTTCATAGAGGGGAAAATGGAAGAAAGAGTCAAAAGAATCCAAGAGGGAAATGAGAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTCTGAAGCATTCAAATCTTTCAACCGAACAAATTCTTGACTTGATCCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCCGGTTGTCCTCAAGCTATGAAGCAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAACTGACTTGGGATGATTACAAACGAATGGAATTTACTCACTGCGTTGTGAACGAGACACTTCGGCTGGGAAATGTTGTTAGGTTCCTTCACAGGAAGGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACGAACCTCAACACTTCAATCCATGGAGATGGCAGAACAGTGGTAGTCTTGGAAGTTGCCCAAGTTCGAGCACAGCAAGCAGTAACTTCTTACCGTTCGGGGGAGGACCAAGACTATGCGCGGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATTCTCAATTACCATTGGGAATTGGCTGATACCGATGAAGCTTTTGCATACCCTTTTGTTGATTTTCCAAAAGGCCTATCTATCAGAGTCCAAACCCACTCTTTGATTTGA 1464 0.4413 MSETHPTLCTLSSILALLLIFLLIKRKQARPRLNLPPGKMGWPFVGETIGYLKPYSATTIGDFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWKDNSTFSAQDEAKKFTFNLMAKHIMSLDPGNMETEELKKEYITFMKGVVSAPLNFPGTAYWKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMKQLREEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDEPQHFNPWRWQNSGSLGSCPSSSTASSNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDEAFAYPFVDFPKGLSIRVQTHSLI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00043 487 SUPERFAMILY Cytochrome P450 32 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gabi4147g00043 487 CDD CYP90-like 67 481 - -
Gabi4147g00043 487 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 Coils Coil 305 332 - -
Gabi4147g00043 487 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 Coils Coil 239 259 - -
Gabi4147g00043 487 Gene3D Cytochrome P450 24 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4147g00043 487 PANTHER CYTOCHROME P450 26 31 462 - -
Gabi4147g00043 487 FunFam Cytochrome P450 90B1 25 483 - -
Gabi4147g00043 487 Pfam Cytochrome P450 36 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00043 Gabi-Chr4147 441301 445389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00043 25 407 Cytochrome P450 AT3G50660 76.485 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00043 K09587 - gmx:100789515 880.937