Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00031 ATGGTTGTGTTGGAGCTTGACAACCTAAGGGGTCACAAGCTGGAGTGCACTTTGTGGGAGCATTATGTGGATGAGGTCCAATCTTTTACGTTTTTATTTGATATACTCAACTCGATAGGTAAGGTTGGGTTAACAAATACAAAATATACAACGAGGATTGTCATGGATACGAAGATGCCAGAGATCGTTGAGTTCAAAAAACGTATTTCGGGTGATGGTGTGGAAAGTAGTCTGAGGATGACTCAGTTGTTTACTCAGTCATCCTATTCTTACGAAAGTGATTTTTTGAAGGAGACTGAAAAGAAGTCTATCAGTGATGTGAAGCTTTGTGGCGAGGTTACGACTTGCATCACGTATGAGACTATAAAATCTATTGAGAGCAAATACAACTGGTGGTACAAGTCTTGCAAAAAATTTCCATTTTCTGTTTGTGAGGATTTTGAGAAATGGTACTGTAAGAACTGCCAAAAACATTGGGAATATTACTATCCGAGATTTAGTGTTCAGGTAAGAGTTGTGGATAACACGGATTCCGCATCATTTCTTCTGTTTGATCGCTACTGTGTGTCTTTGTTGGAGATGAGTGCTGGTGAATTGCGCGAGCTGCATTTCAAGAGGGGTGAGGATTTGGATCAATTTCCAGAAGAGTTAAATGTTCTGAACGAAAAGTCGATGTTGTTCAAGCTAAATATCAAGCAAAAGCATTTTTCAAGAGCAATAGTGAAGTCACGTTTTTTTGTTGGAGTTACATCTTGA 756 0.3902 MVVLELDNLRGHKLECTLWEHYVDEVQSFTFLFDILNSIGKVGLTNTKYTTRIVMDTKMPEIVEFKKRISGDGVESSLRMTQLFTQSSYSYESDFLKETEKKSISDVKLCGEVTTCITYETIKSIESKYNWWYKSCKKFPFSVCEDFEKWYCKNCQKHWEYYYPRFSVQVRVVDNTDSASFLLFDRYCVSLLEMSAGELRELHFKRGEDLDQFPEELNVLNEKSMLFKLNIKQKHFSRAIVKSRFFVGVTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00031 251 CDD RPA1_DBD_C 116 243 IPR047192 -
Gabi4147g00031 251 Gene3D - 85 246 IPR012340 -
Gabi4147g00031 251 SUPERFAMILY Nucleic acid-binding proteins 101 238 IPR012340 -
Gabi4147g00031 251 Pfam Replication factor-A C terminal domain 121 237 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00031 Gabi-Chr4147 319452 320823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00031 51 237 Core DNA Replication Machinery Family AT5G08020 24.365 5.82e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00031 - - adu:107490971 151.754