Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4147g00007 ATGGAGCAGTCACCACCTCAGACTCCTAATTCCATATTCTCAATCAAGAAGGGACGGAGTGGTTATGAACCATCAGACACAGAGACAGAGTGGCAGGATACTCCCCGGCATGAACGAGGCAGAAAGAACATGACTTTGGGTCCTGAAGAAACAAAAGCTCTGACTCTAATGAACAAAAACCATATGGTATTACACAGGAGGCACAATTCAAGGTTTGGAAATGAAGTCTCATCACTTTCAATAGGCCAATCAAGAAAAAGACACCACAGCAAGTCACCCTATAAGCTACGCATAGCAGTTGATGATGATGCTTCATCATCACCCATAACAGGTCTGAGAAATATCAGTCCTTTGCCAAGACCTGAACTTGGAAGAACTGTGTCTCCTTATAGCAGAAAGCATGAGCAAAGAACACCCTCTAGAGAGAACAGACAAGCTTGTTCAGGGCTTCTTGAAGTGGATAAATTAACTGAGAAGCCAAACTACAGGAGATCAGTGACTGCTCCAAGATTGAGGGAGCAACAAAGCAATCATGGGAAAACATTGCAAAATGGGGGAAGGACCAAAGACATGGTTCCGAAACAAAGGGAAGCTTCTACTTTCAAAGCACCTTCAGTGGGAGAAATCAATGAAATGATAGCCCAGATGAAACTATCTACAAATCCCAACGATGATTCTTCATCACTGTTAGAAAGTACAGATTCCATTCAAGCAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAAGGTTTCTTCGTTCCCAAAATCCCTTCAGCAACATGAGTATTTTAGCCCAAGGACCATGGTCACCACGATCAATCCCGTGAGAACCGCCTCCGAAAGCAGAGGAAATGGTGACCTTAACAATGTCTTGTCTCGATCGAGTATGGGCACAAGTTATGCTGCTACAAGCAGAAAGGGAAGTGGAACTGGGAAGTCAAGTGGCACCAGTAGTGTGATAAGTGATGCTAGTGGAAAGACAACTGCAAGCATGCTGAAATTCACATCTAATAGAAAAAAGAACCAGAAAGATGCATGGTTTGCTTGTATGAGAACAGGAACCTGTAAGACTACAAGAAAATCGCCCGAGCGTCGACCAATTGATGAATCTTCCTTCATTGAGAGGGCATCAGTAGTGGAAAGCCTCCCACAATTCTGGGCAGATAAACATAAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAAATAAGTTCTCAGGGCTCTTGTCCTCATATTTTGCTCAAAGGACCCTCTGGTTCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCGTGTTATCATGACCAAAGACCTCTGAAAGTATCTGTCCCAATAACGTCCAGTTCTCATCACATGGAGCTCAATGTAAATTTGGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCCATATATATGCTATTACCCCCGAAGTCAGCAATATTAATTTCAAGTCAGATTATAAAGTAATTATTCTTCATGAGGTTGACAAAGCAGTAGAGAACATCCAGTTCATGATCAAGTGGATTATAGACCGCTATTCAGATATATGCAAACTAGTACTTTGCTGTGAAGATGATGCAAGCATTCTTGAGCCCGTGAAAAACCGTGTCAAAGTTATCGAAGTTGATGCTCCTCAAACTCACGAAATTATTGAGGTTCTTATTCAGATAGCAAAGAAAGAGGAAATTGATCTATCTATGAATTTTGCTATGAAAATTGCTACAAAATCTAAGCAGAACCTAAGGAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATCCCGGTTGGATGGGAGGAGATCATAATAGAAATTGCTGCTGAGATCCTAGCTGATCCATCATATTCACGCCTGCTCTCTGTACGGGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAAATTGATTCTCCAGAAACTCGTGGAACAGTTCCTAAAAAGAATTGATGCCAGCTTAAAAAGGGAGCTCTACTATTGGCATGCTTATTATAATTTGTGGCCAAATTCATGA 2115 0.4147 MEQSPPQTPNSIFSIKKGRSGYEPSDTETEWQDTPRHERGRKNMTLGPEETKALTLMNKNHMVLHRRHNSRFGNEVSSLSIGQSRKRHHSKSPYKLRIAVDDDASSSPITGLRNISPLPRPELGRTVSPYSRKHEQRTPSRENRQACSGLLEVDKLTEKPNYRRSVTAPRLREQQSNHGKTLQNGGRTKDMVPKQREASTFKAPSVGEINEMIAQMKLSTNPNDDSSSLLESTDSIQAGDLFFSRECNALQGKVSSFPKSLQQHEYFSPRTMVTTINPVRTASESRGNGDLNNVLSRSSMGTSYAATSRKGSGTGKSSGTSSVISDASGKTTASMLKFTSNRKKNQKDAWFACMRTGTCKTTRKSPERRPIDESSFIERASVVESLPQFWADKHKPASLNGFICNKQEAQLLKEISSQGSCPHILLKGPSGSGKRELAMALLREIYGDACYHDQRPLKVSVPITSSSHHMELNVNLEPNAKYALMGLIKEISHIYAITPEVSNINFKSDYKVIILHEVDKAVENIQFMIKWIIDRYSDICKLVLCCEDDASILEPVKNRVKVIEVDAPQTHEIIEVLIQIAKKEEIDLSMNFAMKIATKSKQNLRKAIMALEACKAHNYPFSEEQPIPVGWEEIIIEIAAEILADPSYSRLLSVRGKFQMLLLDFVHPKLILQKLVEQFLKRIDASLKRELYYWHAYYNLWPNS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 1 15 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 70 92 - -
Gabi4147g00007 704 Gene3D - 570 627 - -
Gabi4147g00007 704 FunFam replication factor C subunit 3 569 627 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 168 184 - -
Gabi4147g00007 704 Gene3D - 388 568 IPR027417 -
Gabi4147g00007 704 Gene3D - 630 701 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 1 43 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 302 326 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 127 141 - -
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 104 189 - -
Gabi4147g00007 704 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 387 699 - -
Gabi4147g00007 704 SUPERFAMILY post-AAA+ oligomerization domain-like 630 699 IPR008921 GO:0003677|GO:0006260
Gabi4147g00007 704 MobiDBLite consensus disorder prediction 21 43 - -
Gabi4147g00007 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 616 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4147g00007 Gabi-Chr4147 59798 63736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4147g00007 389 698 Core DNA Replication Machinery Family AT5G27740 37.346 5.96e-69 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4147g00007 K10756 - gmx:100795321 967.607