Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00083 ATGAGTGTAGTGGGGTTTGACATTGGGAATGAGAACTGTGTCATTGCTGTAGTGAAGCAACGTGGGATTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGCTTCGGAGAGAAACAGCGGTTTTTAGGGTCTGCTGGTGCTGCTTCTTCTATGATGCACCCCAAGTCCACAATATCTCAAGTGAAGAGACTAATAGGCAGGAGATTTAACGACCCTGATGTTCAAAATGAGCTGAAAATGCTCCCAGTTGAAACTTCTGAGGCCCCAGATGGTGGCATTCTGATTCACTTGAAATACTTGAAGGAGACTCATACATTTACCCCGGTTCAAATTGTAGCAATGCTCTTGGCTCACTTGAAGACTATAACTGAAAACGATTTGGGGACCTCTGTTTCGGATTGTGTTATTGGGGTTCCATCATACTTTACTGACTTGCAGAGACGGGCATATCTCGATGCAGCAACAATTGTTGGGTTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAACTGGTCTTGCTTATGGAGTTTACAAAACAGATTTTCCCAGTGCAGCTCCTGTGTATGTTGCATTTATTGACATAGGTCAGTGTGATACTCAGGTCTCCATTGCAGCATTTCAGGCTGGGAAAATGAATATACTTTCACATGCTTTTGACAGGAACTTGGGGGGGAGAGACTTTGATGAGGTTCTATTTAGTCATTTTGCGGCAAAATTTAAGGAACAGTACAGCATTGACGTGTATTCTAGTGCCAAGGCATGTAATAGGCTGCGTTCAGCATGTGAGAAGTTAAAGAAAGTTTTGAGCGCAAATCTAGAGGGGCCTCTGAACATTGAGTGCTTGATGGATGAAAAAGATGTTAATGGCTTTATCAAGAGGGAGGAATTTGAGAATCTGGCTGCAGGATTATTGGAGAGAATTTATATTCCTTGCAACAAAGCATTAGCCGATGCAGGCTTGACTGTAGAAAATATATATTCTGTTGAGTTAGTTGGTTCAGGTTCTAGGATTCCAGCTATAACTAGAATATTAACTTCTCTATTCAAGAGAGAACTCAGCCGAACGCTGAATGCAAGTGAGTGTGTGGTTCGTGGTTGTGCTCTTCAGTGTGCAATGCTCAGTCCTGTTTTCCGTGTCAGAGAATATGAGGTCCAGGATTCTATTCCTTTTTCAATTGGACTTTCATCAGATGAAAGTCCAATTTGTGCAGGATCAAATGGTGTACTTTTCCCAAAAGGCCAACCCATTCCTAGTGTTAAAACTTTAACATTTCAGCGCAGTAATATGCTCCATTTGGAAGCATTCTATGCTAATCCAGATGAAGTACCACCTGGGACGTCTCCAAAAATTAGTTGCTTCAAAATTGGTCCTTTCCATGGATCCCATGGTACTAAGACGAGAGTTAAAGTTAAAGTTCAACTAAATTTGCATGGCATTGTCAGTATCGAATCAGCTACATTGGTCGAAGATCATGTGGATGATTCAGTTCCAACTGGTGATTATCATTCAGCTTCTACAGCAATGGATGTTGAACCCATATCTGAGACAGTTGAAAATGTCATTGATGATAGTATCAATAAAAAAAAGTGTGAATCTCCACGTCATTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGGCTTCATGTACCAGTGAATGAGAATATCTATGGTGGAATGACCAAGGCTGAGATCTTGGAAGCTCAAGAAAAAGAACTCCAGTTGACCCAGCAGGACAGAACAATGGAGCTAACCAAAGACAAGAAGAATTCCTTGGAGTCTTATATCTATGAAATGAGGAGTAAGCTCTTCAACTCATATCGGGGCTTTGCAAGTGAGCAAGAGAGGGATGGCATATCTAGGAGTCTGCAAGAGACTGAGGAGTGGCTTTATGATGATGGTGATGATGAAACTGTACATGCTTATTCTGCAAAACTAGAAGATATAAAACAGCTGGTGGATCCAATCGAGAATCGGTATAAAGATGAAGAAGCAAGAGCACAAGCCACGAGAGAGTTGTTAAGTTGCATTGTAGAAAATCGCATGTCTGCAGATTCCCTTCCAGCCCAAAATAAAGAACTGATCATCAATGAATGCAATAAAGCAGAGCAGTGGCTAAGAGAGAAGATGCAGCAACAAGATACTTTACCTAAGAGCTCTGATCCAGTATTTTGGTCAAGTGATATCAAGAGCAAGGCAGAGGATTTAAACTCAGTATGCCTACGGATATTGGGATCTAAAGGTTCTCCAATTCCAGAAGACAAGAGTGAACACAATCAGAGTACTTCTAATCATCGTTGA 2325 0.4133 MSVVGFDIGNENCVIAVVKQRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASSMMHPKSTISQVKRLIGRRFNDPDVQNELKMLPVETSEAPDGGILIHLKYLKETHTFTPVQIVAMLLAHLKTITENDLGTSVSDCVIGVPSYFTDLQRRAYLDAATIVGLKPLRLIHDCTATGLAYGVYKTDFPSAAPVYVAFIDIGQCDTQVSIAAFQAGKMNILSHAFDRNLGGRDFDEVLFSHFAAKFKEQYSIDVYSSAKACNRLRSACEKLKKVLSANLEGPLNIECLMDEKDVNGFIKREEFENLAAGLLERIYIPCNKALADAGLTVENIYSVELVGSGSRIPAITRILTSLFKRELSRTLNASECVVRGCALQCAMLSPVFRVREYEVQDSIPFSIGLSSDESPICAGSNGVLFPKGQPIPSVKTLTFQRSNMLHLEAFYANPDEVPPGTSPKISCFKIGPFHGSHGTKTRVKVKVQLNLHGIVSIESATLVEDHVDDSVPTGDYHSASTAMDVEPISETVENVIDDSINKKKCESPRHSADGTRKDKANRRLHVPVNENIYGGMTKAEILEAQEKELQLTQQDRTMELTKDKKNSLESYIYEMRSKLFNSYRGFASEQERDGISRSLQETEEWLYDDGDDETVHAYSAKLEDIKQLVDPIENRYKDEEARAQATRELLSCIVENRMSADSLPAQNKELIINECNKAEQWLREKMQQQDTLPKSSDPVFWSSDIKSKAEDLNSVCLRILGSKGSPIPEDKSEHNQSTSNHR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00083 774 MobiDBLite consensus disorder prediction 759 774 - -
Gabi4144g00083 774 MobiDBLite consensus disorder prediction 753 774 - -
Gabi4144g00083 774 Gene3D - 568 679 IPR029048 -
Gabi4144g00083 774 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 539 IPR029047 -
Gabi4144g00083 774 Gene3D - 5 374 - -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 4 1 76 - -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 4 230 313 - -
Gabi4144g00083 774 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 4 105 194 - -
Gabi4144g00083 774 Gene3D Actin; Chain A, domain 4 230 313 - -
Gabi4144g00083 774 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Gabi4144g00083 774 CDD HSPA4_like_NDB 2 381 - -
Gabi4144g00083 774 Gene3D - 38 113 - -
Gabi4144g00083 774 PANTHER HSC70CB, ISOFORM G-RELATED 1 764 - -
Gabi4144g00083 774 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 570 668 IPR029048 -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 472 488 - -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 30 42 - -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 332 348 - -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 363 383 - -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 2 15 - -
Gabi4144g00083 774 PRINTS 70kDa heat shock protein signature 140 160 - -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 16 isoform A 387 566 - -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 4 568 678 - -
Gabi4144g00083 774 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 601 IPR029047 -
Gabi4144g00083 774 Pfam Hsp70 protein 3 668 IPR013126 GO:0005524|GO:0140662
Gabi4144g00083 774 Gene3D - 186 360 - -
Gabi4144g00083 774 FunFam Heat shock 70 kDa protein 4 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00083 Gabi-Chr4144 630618 635606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00083 4 431 Calmodulin-binding Proteins AT1G16030 33.411 3.89e-77 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00083 K09489 - gmx:100795914 1270.37