Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00042 ATGTTTAAATATGCTAATAAATCTAAATCAATTCATAGTGGCACACAGTCGCTCTCCATGAACGGCGCGTCGTTTGGAGCTCCCTCCCCACAATCCAACATGGATCGCAAGATGGCATCTGCGGAACAACTTGTTCTCGAACTCGGCAACCCCGATCTCCGAGAAAACGCTCTTCTCGAACTCTCAAAGAAGAGAGAGTTATTCCAGGATCTCGCTCCATTATTGTGGAATTCTTTTGGTACCATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCGGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTCGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGAATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCCTTGGTGAAGGTTGATGACACAGAAGTTGTAAGTTTTCTTCTTTCGACAGAGATAATTCCGCTTTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCAACATTTATAGTTCAAAAAATTCTATTGGACGATGTTGGTTTGGATTATATTTGTGCTACAGCAGAGCGCTTTTTTGCAGTAGGTCGAGTTTTGGCAAACATGGTCTTAGCTCTTGCTGAGCAGCCTTCATCTCGTCTTTTGAAGCATATTATACGATGTTATCTTCGTCTGTCAGATAATCAAAAGGCTTGTGATGCATTAAGAAGCTGTCTTCCGGAAATGTTAAGGGATGGCACTTTCAGTAATTGCCTTCGTGAAGATCCAACAACTAGGAGGTGGCTACAGCAGTTGCTTCACAATGTTGGAGTGAACCGGATTCCCACTCTACCAGCTGGAGGAGGATTCGATCATATGATATGGTTACATGAGAATAGAGATCTTGCTTAG 990 0.4273 MFKYANKSKSIHSGTQSLSMNGASFGAPSPQSNMDRKMASAEQLVLELGNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLNPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVVSFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICATAERFFAVGRVLANMVLALAEQPSSRLLKHIIRCYLRLSDNQKACDALRSCLPEMLRDGTFSNCLREDPTTRRWLQQLLHNVGVNRIPTLPAGGGFDHMIWLHENRDLA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00042 329 Pfam Cell differentiation family, Rcd1-like 44 302 - -
Gabi4144g00042 329 MobiDBLite consensus disorder prediction 1 33 - -
Gabi4144g00042 329 PANTHER UNCHARACTERIZED 32 305 IPR007216 GO:0006402|GO:0030014
Gabi4144g00042 329 SUPERFAMILY ARM repeat 47 276 IPR016024 -
Gabi4144g00042 329 MobiDBLite consensus disorder prediction 8 33 - -
Gabi4144g00042 329 Gene3D - 33 303 IPR011989 -
Gabi4144g00042 329 FunFam Cell differentiation protein RCD1 35 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00042 Gabi-Chr4144 316552 321827 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gabi4144g00042 Rcd1 7.6e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00042 K12606 - gmx:100784529 547.354