Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00032 ATGAGAGATGATAACTCCAAGAAAAGCAAGCTTTCGTGGCCCAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGTCGAGGACTTTCAAGCAGATGGTGTCCTTTGCGGAGGTGTTGATGAAGAGTATAGGAGAAACTATTCATATAGGGAGGCATGCACTGTCAAGAAAAGCAAAATAGGTTCAACTAGCTTAGATCTTCTTACGAAGAATACTGGTAGCAAAAGATCAATAGAGGAACATGCAGCATCTGAAACAATGGATGATAAGAGAAATAATGAGTTTGAAGCTTTGATAGCTGAATTGCACCAGATGAATGCTGAAAATCAACGTTTAAGAGAGTTGGTTGATCAGGTTAACAATAACTACAATGCTCTACACATGCAACTTATCAAGCTAATGCAGATGCAGCAAAGCCATGGGATTAGCAGAGTCAGAGGGGAGAATGATAAGAAAGAAGATATGGTTCCAACAAGGTCATTTTTAGAAATGGGTGTTGCTGAAAAGGATGAGTCTTCCCAGCAATCTTCAAAGGGTGAACTGCGAGAAAGCAAAAGCAAGGTTGAATTGATGGAGTGTAAGACACATCAAATTTGCACCACCAAAGATCTTGTTTTGGATCCATATAAACTGGATTCTGGCAGGGAAAGTTCAAAAGCCAGAGTGGAATTACAAGCATTCCCAGGGTGGATCTCTAACGAAGTTCCTAGATTGAGTTCTTTCAAGGATCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGAGCAAGATCAGAATCTTCAATGATTGCAGATGGATGCCAGTGGCGAAAGTATGGGCAGAAGATGGCGAAAGGGAATCCTTGTCCACGAGCTTATTATCGTTGCACAATGAGAACTGGTTGTCCAGTACGCAAACAAGTACAAAGGTGTGCTGACGATCGAAGTGTGTTGATCACTACATACGAAGGACAGCATAATCATCCATTACCTCCCACTGCCCAAACAATGGCATCAACCACTTCTGCAGCTGCTTCAATGCTTCTTTCAGGATCAATGCCTAGTGCAGATGGACTAATTAATCCAAGCATATTAGAAAGTGCTGCACTTAATCCATGCTCACAAAACATGGCAACTCTTTCAGCCTCAGCCCCATTTCCAACTATCACATTGGATCTCACTCAAAGTGCTACTAATTCCTCACAACAGCTACAAAGGGAACCACAGGGCCAACTTAGTCTCCTAACTCCACTTTTGGCTCAAAAGTTTATCTCAGCTCCTAATATTTTTGGACATGCCCTGTGTGATCAAACTAAGCTTTCTAGCTTACATGATCAGTCTCAGGGAACAAACACAACTTCATCATTTGCTGATACATTACATGGAGCTAAGGCTGCTATCACTGCAGACCCGAATTTTACTGCAGCTCTTGTGGCCGCTATAACATCAATCGTTGGGAGTTCACATCCAAACAACAACGGTACCAGTAATACAAATGGAGATCAGCAGTAA 1512 0.418 MRDDNSKKSKLSWPKSLVKKWFNIKSKVEDFQADGVLCGGVDEEYRRNYSYREACTVKKSKIGSTSLDLLTKNTGSKRSIEEHAASETMDDKRNNEFEALIAELHQMNAENQRLRELVDQVNNNYNALHMQLIKLMQMQQSHGISRVRGENDKKEDMVPTRSFLEMGVAEKDESSQQSSKGELRESKSKVELMECKTHQICTTKDLVLDPYKLDSGRESSKARVELQAFPGWISNEVPRLSSFKDQASETMSMIKKARVSVRARSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMRTGCPVRKQVQRCADDRSVLITTYEGQHNHPLPPTAQTMASTTSAAASMLLSGSMPSADGLINPSILESAALNPCSQNMATLSASAPFPTITLDLTQSATNSSQQLQREPQGQLSLLTPLLAQKFISAPNIFGHALCDQTKLSSLHDQSQGTNTTSSFADTLHGAKAAITADPNFTAALVAAITSIVGSSHPNNNGTSNTNGDQQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00032 503 Gene3D WRKY domain 255 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4144g00032 503 ProSiteProfiles WRKY domain profile. 265 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4144g00032 503 Pfam WRKY DNA -binding domain 272 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4144g00032 503 FunFam probable WRKY transcription factor 31 255 332 - -
Gabi4144g00032 503 SUPERFAMILY WRKY DNA-binding domain 263 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4144g00032 503 Coils Coil 97 131 - -
Gabi4144g00032 503 SMART WRKY_cls 270 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4144g00032 503 MobiDBLite consensus disorder prediction 167 188 - -
Gabi4144g00032 503 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 79 497 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00032 Gabi-Chr4144 239603 250253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00032 64 494 WRKY Transcription Factor Family AT1G62300 46.220 2.69e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4144g00032 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00032 - - vum:124848283 545.428