Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00029 ATGTCGGCGTCTGAGATTCTTCGTGAACTGGACTCTTTGAAGGATGCCAAGACCAAAATCGACCACAAAATCTCTCTGCTTGAAGCTCAACTGAGGGATATCAATCTCCAAAACGACGCCGCAACAACCAATGGCTCTTCATCGTACCCCACAAATGGATTGGCCCCTCACATGATCCACAGATACAGTCGTCACCTTGTGCTCCCTTCATTTGGGGTTCAAGCTTGTGGTGTTGGCCGCTTGGGTATTGTTGATCATGACCGGGTTGAGCTGAGCAATATGCATAGGCAGATTATCCATACAGAAGCATATGTTGGTCAGCCGAAAGTGAAATCTGCTGGTGCTGCTTGTCGCTCGATAAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGTTACATGATCAGTGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGACAGCTCACCGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTGCAACAGCATGCCAAAGCTGTGCTGATGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTTGATGCGTTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCTATGTGAAGCTTGTGGAGAAAATGCAACGTTTACCCAGCAGCAATTCCGAGAATTCGATTACGAGAAGTTCACTCAGACTCCCTTGTGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCACTGAATCAAGAATCAGCAGCAATGAGTACAGTGAAATAATTCATAACAAGGAACCACATGTGCTGGTTGACGTTAGACCAGCTCACCATTTTAAGATTGTCTCTCTCCCTAAGTCTTTGAACATTCCACTCTCAAATTTAGAGGCTAGGTTGCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGACACAGGTGTTGTTTCTGGATCAAGTGCGCAATTATATGTAGTGTGCAGAAGAGGAAATGATTCTCAAAGGGCTGTTCAAAATCTTCAGAAAATTGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGTCTTGGGCTCACAATGTGGATCCTAACTTCCCTACATATTAG 1287 0.4468 MSASEILRELDSLKDAKTKIDHKISLLEAQLRDINLQNDAATTNGSSSYPTNGLAPHMIHRYSRHLVLPSFGVQACGVGRLGIVDHDRVELSNMHRQIIHTEAYVGQPKVKSAGAACRSINSTIQVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPATACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALSGRIRIVKIRGRSMLCEACGENATFTQQQFREFDYEKFTQTPLCVPPLKLNLLPTESRISSNEYSEIIHNKEPHVLVDVRPAHHFKIVSLPKSLNIPLSNLEARLPEISSALKKEEEDTGVVSGSSAQLYVVCRRGNDSQRAVQNLQKIGFTSAKDIVGGLESWAHNVDPNFPTY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00029 428 Coils Coil 351 371 - -
Gabi4144g00029 428 FunFam Adenylyltransferase and sulfurtransferase MOCS3 73 277 - -
Gabi4144g00029 428 FunFam Adenylyltransferase and sulfurtransferase MOCS3 310 428 - -
Gabi4144g00029 428 Pfam ThiF family 75 270 IPR000594 -
Gabi4144g00029 428 Coils Coil 24 44 - -
Gabi4144g00029 428 Gene3D - 57 279 - -
Gabi4144g00029 428 Gene3D - 310 428 IPR036873 -
Gabi4144g00029 428 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 75 279 IPR045886 -
Gabi4144g00029 428 ProSiteProfiles Rhodanese domain profile. 323 426 IPR001763 -
Gabi4144g00029 428 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 58 395 IPR035985 GO:0008641
Gabi4144g00029 428 SMART rhod_4 313 423 IPR001763 -
Gabi4144g00029 428 CDD ThiF_MoeB_HesA_family 61 262 - -
Gabi4144g00029 428 Pfam Rhodanese-like domain 315 418 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00029 Gabi-Chr4144 225731 231693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00029 78 428 Sulfurtransferasese or Rhodanese AT5G55130 73.580 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00029 K11996 - gmx:100814736 743.421