Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00028 ATGTCGGCGTCTGAGATTCTTCGTGAACTGGACTCTTTGAAGGATGCCAAGACCAAAATCGACCACAAAATCTCTCTGCTTGAAGCTCAACTGAGGGATATCAATCTCCAAAACGACGCCGCAACAACCAATGGCTCTTCATCGTACCCCACAAATGGATTGGCCCCTCACATGATCCACAGATACAGTCGTCACCTTGTGCTCCCTTCATTTGGGGTTCAAGGGCAATCAAATCTGTTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCTCCTGCTTTGTTATACTTTGCAGCTTGTGGTGTTGGCCGCTTGGGTATTGTTGATCATGACCGGGTTGAGCTGAGCAATATGCATAGGCAGATTATCCATACAGAAGCATATGTTGGTCAGCCGAAAGTGAAATCTGCTGGTGCTGCTTGTCGCTCGATAAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGTTACATGATCAGTGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGACAGCTCACCGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTGCAACAGCATGCCAAAGCTGTGCTGATGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTTGATGCGTTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCTATGTGAAGCTTGTGGAGAAAATGCAACGTTTACCCAGCAGCAATTCCGAGAATTCGATTACGAGAAGTTCACTCAGACTCCCTTGTGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCACTGAATCAAGAATCAGCAGCAATGAGTACAGTGAAATAATTCATAACAAGGAACCACATGTGCTGGTTGACGTTAGACCAGCTCACCATTTTAAGATTGTCTCTCTCCCTAAGTCTTTGAACATTCCACTCTCAAATTTAGAGGCTAGGTTGCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGACACAGGTGTTGTTTCTGGATCAAGTGCGCAATTATATGTAGTGTGCAGAAGAGGAAATGATTCTCAAAGGGCTGTTCAAAATCTTCAGAAAATTGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGTCTTGGGCTCACAATGTGGATCCTAACTTCCCTACATATTAG 1368 0.4459 MSASEILRELDSLKDAKTKIDHKISLLEAQLRDINLQNDAATTNGSSSYPTNGLAPHMIHRYSRHLVLPSFGVQGQSNLLKSSILVVGAGGLGAPALLYFAACGVGRLGIVDHDRVELSNMHRQIIHTEAYVGQPKVKSAGAACRSINSTIQVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPATACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALSGRIRIVKIRGRSMLCEACGENATFTQQQFREFDYEKFTQTPLCVPPLKLNLLPTESRISSNEYSEIIHNKEPHVLVDVRPAHHFKIVSLPKSLNIPLSNLEARLPEISSALKKEEEDTGVVSGSSAQLYVVCRRGNDSQRAVQNLQKIGFTSAKDIVGGLESWAHNVDPNFPTY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00028 455 ProSiteProfiles Rhodanese domain profile. 350 453 IPR001763 -
Gabi4144g00028 455 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 7 455 IPR028885 GO:0002143|GO:0004792|GO:0005829
Gabi4144g00028 455 Coils Coil 378 398 - -
Gabi4144g00028 455 Coils Coil 24 44 - -
Gabi4144g00028 455 FunFam Adenylyltransferase and sulfurtransferase MOCS3 55 304 - -
Gabi4144g00028 455 FunFam Adenylyltransferase and sulfurtransferase MOCS3 337 455 - -
Gabi4144g00028 455 SMART rhod_4 340 450 IPR001763 -
Gabi4144g00028 455 Pfam ThiF family 62 297 IPR000594 -
Gabi4144g00028 455 Gene3D - 57 306 - -
Gabi4144g00028 455 Pfam Rhodanese-like domain 342 445 IPR001763 -
Gabi4144g00028 455 Gene3D - 337 455 IPR036873 -
Gabi4144g00028 455 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 57 422 IPR035985 GO:0008641
Gabi4144g00028 455 CDD ThiF_MoeB_HesA_family 61 289 - -
Gabi4144g00028 455 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 58 306 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00028 Gabi-Chr4144 225731 231693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00028 100 455 Sulfurtransferasese or Rhodanese AT5G55130 72.829 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00028 K11996 - gmx:100814736 793.497