Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00025 ATGGATTGTGGTGGAAGGGAAATCACAAATACCATACTTGTTGATCGATATGGCAAAGGAGAATTCAAAACGGTTCAAGCTGCCATTGATTCGATAAAGGATAACAATGATCGATGGGTCAAAGTTCATATAAATGCTGGTATATACGTAGAGAAAGTTCAAATCTCCTTATACAAGTCTTGCGTCTTCTTAGAGGGCGATGGCAAAGATGTCACGACCATTACAAATGATAAAAATACTGCTGCTACGTTCACTTCTTCACCATCCAATGTTATTGTACATGGCATTACCTTCCAGAACTCATTTAATCTGGTGGGAGAAAGACCAATGTCACCAGCAATGGCAGCAAGCATCTATGGAGACAAATCTGTCTTCTATAAGTGTGCTTTCATGGGTTTACAAGACACTTTGTTTGATGCAATGGGACGCCATTACTTTAAAGATTGCTATATTCAAGGTGAAGTGGACTTCATTTATGGTGGTGGTCAATCTTATTATGAGGATTGTAAAATCCATGCCACGCAAGGAAAATCTCCTCCGGGTTTTATAACAGCTCAAGCCCGTGAATCAGAAAAAGATACAAGTGGTTTTATATTCAAAAAGGGATTTGTATATGGGAGTGGTCAAGTAAATCTTGGAAGAGCCTATCGAAATTACTCCAGAGTTATATTTCAAGAAACATACTTGTCTTCGGTAGTAACCCCAGAAGGATGGAATTCCTGGCGTTTCAACGGCCAAGAGTACAAGTTTACTTATGCTGAGGTCAACTGTACTGGTCCAGGGGCTAATACTTCAAAACGTTTGTGGGAAAAGAAACTTACTTCCTCAGAGCTAAACGAATTTTCTTTATCTTCTTTCATCAACAAAGATGGGTGGCTTTCCAACTTACCAATTAGCTTTTCGTAA 906 0.3907 MDCGGREITNTILVDRYGKGEFKTVQAAIDSIKDNNDRWVKVHINAGIYVEKVQISLYKSCVFLEGDGKDVTTITNDKNTAATFTSSPSNVIVHGITFQNSFNLVGERPMSPAMAASIYGDKSVFYKCAFMGLQDTLFDAMGRHYFKDCYIQGEVDFIYGGGQSYYEDCKIHATQGKSPPGFITAQARESEKDTSGFIFKKGFVYGSGQVNLGRAYRNYSRVIFQETYLSSVVTPEGWNSWRFNGQEYKFTYAEVNCTGPGANTSKRLWEKKLTSSELNEFSLSSFINKDGWLSNLPISFS 301
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00025 301 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 294 - -
Gabi4144g00025 301 Gene3D - 5 301 IPR012334 -
Gabi4144g00025 301 FunFam Pectinesterase 6 297 - -
Gabi4144g00025 301 Pfam Pectinesterase 12 289 IPR000070 GO:0030599|GO:0042545
Gabi4144g00025 301 SUPERFAMILY Pectin lyase-like 9 300 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4144g00025 Gabi-Chr4144 179869 181577 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00025 2 247 Carbohydrate Esterase AT2G19150 45.490 1.10e-70 218