Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00024 ATGGATTGTGGTGGAAGGGAAATCACAAATACCATACTTGTTGATCGATATGGCAAAGGAGAATTCAAAACGGTTCAAGCTGCCATTGATTCGATAAAGGATAACAATGATCGATGGGTCAAAGTTCATATAAATGCTGGTATATACGTAGAGAAAGTTGAAATCTCCTTATACAAGTCTTGCGTCTTCTTAGAGGGTGATGGCAAAGATGTCACGACCATTACAAATGATAAAGACACTGCTGCTACGTTCACTTCTTCACCATCCAATGTTATTGTACATGGCATTACCTTCAAGAACTCATTCAATCTGGTGGGACAAAGACCAATGTTACCCGCAAAGGCAGCAAGCATCTATGGAGACAAATCTGTCTTCTATAAGTGTGGTTTCATGGGTTTACAGGACACTTTGTTTGATGCAATGGGACGCCATTACTTTAAAGATTGTTATATTCAAGGTGAAGTTGACTTCATTTATGGTGGTGGTCAATCTTATTATGAGGATTGTGCAATCCATGCCACGCAAGGAAAATCTCCTCCGGGTTTTATAACAGCCCAAGCCCGTGAATCAGAAAATGATACAAGTGGTTTTGTATTCAGAAAGGGATTTGTATATGGGAGTGGTCATATAAATCTTGGAAGAGCCTATCGAAATTACTCTAGAGTTATATTTCAAGAAACATACTTGTCTTCGGTAGTAACCCCAGAAGGATGGAATTCATGGAATTACAAGGGTCATGAGTACAAGTTTACTTATGCTGAGGTCAACTGTACTGGTCCAGGGGCTAATACTTCAAAACGCTTGTGGGAAAAGAAACTTACTTCCTCAGAGCTAAATGAATTTTCTTTATCTTCTTTCATCAACAAAGATGGGTGGCTTTCCAACTTACCAATTAGCTTTTCGTAA 906 0.3896 MDCGGREITNTILVDRYGKGEFKTVQAAIDSIKDNNDRWVKVHINAGIYVEKVEISLYKSCVFLEGDGKDVTTITNDKDTAATFTSSPSNVIVHGITFKNSFNLVGQRPMLPAKAASIYGDKSVFYKCGFMGLQDTLFDAMGRHYFKDCYIQGEVDFIYGGGQSYYEDCAIHATQGKSPPGFITAQARESENDTSGFVFRKGFVYGSGHINLGRAYRNYSRVIFQETYLSSVVTPEGWNSWNYKGHEYKFTYAEVNCTGPGANTSKRLWEKKLTSSELNEFSLSSFINKDGWLSNLPISFS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00024 301 SUPERFAMILY Pectin lyase-like 9 300 IPR011050 -
Gabi4144g00024 301 Gene3D - 5 301 IPR012334 -
Gabi4144g00024 301 FunFam Pectinesterase 6 297 - -
Gabi4144g00024 301 Pfam Pectinesterase 12 289 IPR000070 GO:0030599|GO:0042545
Gabi4144g00024 301 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00024 Gabi-Chr4144 168485 170289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00024 2 247 Carbohydrate Esterase AT2G19150 45.490 7.91e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00024 - - gmx:100803932 438.343