Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4144g00022 ATGAGGAGGGGCAGAGGAGGAGCGGCGGCGGCGGAGAAGAAGGAGCTGAACGGATCCGTGCCGAGGACGATATTAAAAGAGCCTCGGTACCGTGGAGTGAGGAAGAGACCATGGGGGAGGTTCGCGGCGGAGATCAGAGATCCGTTGAAGAAAGCGAGGGTGTGGCTTGGAACCTTTGATTCCGCCGAGGAAGCTGCTCGAGCTTACGACGCCGCCGCTCGCACCCTCCGTGGACCCAAGGCCAAAACCAATTTTCCACTTTCCCCTTTCTGTTACCACAACCACCGCCCCACCACCGATCCTTTCTTCTACACCGCCACCAACGGTGGTTTCCAAGAACACCAGGTTAATAACCCTCAGAGACCCACCTCCAGTGGTATGAGCAGCACCGTTGAATCTTTCAGTGGCCCCCGCCCTCCCTCCTCAGCCGCCGTGAAGCCGTTGTTGACGATCAACCGCAGATATCCCCGAACTCCCCCTGTCGTTCCCGAAGACTGCCACAGCGACTGCGATTCCTCCTCGTCGGTGGTCGACGACGGTGACGGTGACGGTTACAACATCGCTTCGTCGTCGTTTCGTCCGCCGTTCACTTTCGATCTAAATGCACCGCCGTTGGATGATGCTGACCTGGCACTCTGCCTTTGA 645 0.5845 MRRGRGGAAAAEKKELNGSVPRTILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARTLRGPKAKTNFPLSPFCYHNHRPTTDPFFYTATNGGFQEHQVNNPQRPTSSGMSSTVESFSGPRPPSSAAVKPLLTINRRYPRTPPVVPEDCHSDCDSSSSVVDDGDGDGYNIASSSFRPPFTFDLNAPPLDDADLALCL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4144g00022 214 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Gabi4144g00022 214 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Gabi4144g00022 214 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Gabi4144g00022 214 SMART rav1_2 29 94 IPR001471 GO:0003700|GO:0006355
Gabi4144g00022 214 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4144g00022 214 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Gabi4144g00022 214 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Gabi4144g00022 214 MobiDBLite consensus disorder prediction 116 137 - -
Gabi4144g00022 214 FunFam Ethylene-responsive transcription factor 2 29 87 - -
Gabi4144g00022 214 MobiDBLite consensus disorder prediction 116 143 - -
Gabi4144g00022 214 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Gabi4144g00022 214 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 180 - -
Gabi4144g00022 214 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4144g00022 Gabi-Chr4144 156586 158041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4144g00022 1 210 AP2-EREBP Transcription Factor Family AT1G50640 60.619 2.66e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi4144g00022 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4144g00022 K09286 - gmx:100803943 245.358