Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00096 ATGTTACCTGAAACACTAGCTATCCCTGCAATCCTCCTTGTGACATTCATTTTTATTCTATCAGCTTCTCTATTTCATATTCCAAAACAACATCAACAAGATGGGAAACATCCACCAGGTCCCAAGTCCTTGCCAATTATTGGTAACCTCCACATGCTAGGGAATCTCCCACACCGTACCCTTCAAGCCCTTGCCAGAAAATATGGACCCATCATGTCCTTAAAGTTAGGACATGTTCCTACCATTGTGGTTTCATCCCCTGAAACTGCAGAGCTATTCCTCAAGACCCATGACACTGTTTTTGCTAGCAGGCCTAAAATTCAAGCCTCTGAATATATGTTTTATGGAGGAAAAGGATTAGGATTAGCTCAGTATGGTTCCTACTGGCGCAACATGAGGAAATTGTGTACCTTACAACTTCTAAGTGCATCAAAAGTTGAGATGTTTGCACCCTTGAGGAGTGAGGAGTTGGGACAATTTTTGAGGTCACTTGAGAAAGCTTCAGCCTCACGTGAGGTTGTGGATATCAGTGAGCTTGTTGGGGAGCTTATAGCAAATATCACTTATAAAATGGTGTTGGGTTGCAATAAGGATGATAGGTTTGATTTAAAAGGACTTATTGGTGAGGCAATGAAGTTGGCTGGAACTTTCAATTTGGCAGATTTTTTGCCTTGGCTTAGCATATTTGATCTTCAGGGACTAGCAAGTCGAATGAAGAAAACAAGTAAAGTATTTGATCAAGTGGTGGAGCAGATCATCACAGATCATGAGCATCCATCAGATAATGAAAAGAAAGACCCTCACGATAAGGATTTTGTTGACATATTCTTATCACTAATGCACCAATCCATGGATAATCCACAGGATGAACAGAAACAAGTCATTGATAGAACTAATATCAAAGCAATTATATTGGACATGATTGGTGGAGCATTAGACTCATCTACTGCAGCAATTGAGTGGGCACTTTCAGAACTCTTAAGACATCCAAGGGTTATGAAGAGGCTTCAACATGAGCTAGAAAATGTAGTGGGGTTGAATAAACAAGTGGTGGAAACTGACTTAGAAAAGTTGCCTTATCTAAATATGGTGGTGAAGGAGACCTTAAGATTATACCCACCTGGACCTTTGCTAGCACCTCGTGAGTGTCTAAAAGATGTTGTTATTGATGGCTATTACATAAAGAAAAAGACAAGAATCATAATAAATGCATGGGCAATAGGGAGAGACCCTAAAGTATGGTCACATAATGCTGATGTGTTTTATCCAGAGAGATTTGTCAATAGCAATGTTGACCTTAGGGGACAAGACTTTCAACTTATACCCTTTGGTTCAGGTCGCAGAGGGTGTCCTGGGATTCTTTTGGGCCTAACTACTATTAGACTTGTTCTGGCTCAACTGGTGCATTGCTTCAGTTGGGAGCTTCCATTGGGCTTGCCATCAGATAACTTGGACATGACTGAGAGGTTTGGGCTCTCAATGCCAAGAAATGAGCACTTGTTAGCTGTGCCAACTTATCGAGATGACTTTGCATTTGGTACCGTTTAA 1548 0.4089 MLPETLAIPAILLVTFIFILSASLFHIPKQHQQDGKHPPGPKSLPIIGNLHMLGNLPHRTLQALARKYGPIMSLKLGHVPTIVVSSPETAELFLKTHDTVFASRPKIQASEYMFYGGKGLGLAQYGSYWRNMRKLCTLQLLSASKVEMFAPLRSEELGQFLRSLEKASASREVVDISELVGELIANITYKMVLGCNKDDRFDLKGLIGEAMKLAGTFNLADFLPWLSIFDLQGLASRMKKTSKVFDQVVEQIITDHEHPSDNEKKDPHDKDFVDIFLSLMHQSMDNPQDEQKQVIDRTNIKAIILDMIGGALDSSTAAIEWALSELLRHPRVMKRLQHELENVVGLNKQVVETDLEKLPYLNMVVKETLRLYPPGPLLAPRECLKDVVIDGYYIKKKTRIIINAWAIGRDPKVWSHNADVFYPERFVNSNVDLRGQDFQLIPFGSGRRGCPGILLGLTTIRLVLAQLVHCFSWELPLGLPSDNLDMTERFGLSMPRNEHLLAVPTYRDDFAFGTV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00096 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gabi4141g00096 515 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 CDD CYP71-like 67 500 - -
Gabi4141g00096 515 Pfam Cytochrome P450 38 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 FunFam Cytochrome P450 83B1 25 503 - -
Gabi4141g00096 515 PANTHER CYTOCHROME P450 93A3-LIKE 12 507 - -
Gabi4141g00096 515 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4141g00096 515 SUPERFAMILY Cytochrome P450 38 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00096 Gabi-Chr4141 689464 691915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00096 32 496 Cytochrome P450 AT3G48310 41.151 6.94e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00096 - - gmx:100798918 738.413