Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00086 ATGGACGACGGCGAGCTTGATTTCTCGAACCATGAAGTGTTCTCGAGTCCAAACATGGGGGAACTACCTAGCAGTGGTTCGATGGATAGTTTCTTCGACGAGCTTCTGAAGGACACACATGCATGCACTCACACCCACACTTGTAACCCTCCTGGCCCTGATTTTTCACATACACACACCTGTTATCATGTCCATACCAAGATTGTGCCTGCATCTGGTGATGAAGATCAGGCTGCCACTGATGATCATGATTCCGCTGAGTCTGCAGAAAAGAAGTCAAAAAAGCGTCCCACAGGGAACAAAGAAGCTGTTCGCAAATACAGGGAGAAGAAGAAAGCCCGGGCTGCGTCTCTTGAGGATGAGGTTGTTAAATTGAGGGCTTTGAATCAGCACTTGATGAAGAAGTTGCAAGGTCAGGCTGCTTTAGAGGCTGAGATTGCAAGGCTTAAGTGCTTGCTAGTTGACATTAGGGGAAGGATTGAAGGAGAAATTGGATCGTTCCCATATCAGAAATCACCTAATTCGAACCCACCAATCCCAAACTTGCCTGGTTCTTATGTGATGAACCCTTGCAGCATGCAGTGTGATGATCGTGTATATTGTCTTCATCCGGGAGCAGATGGGAAGATTACAGAAGGTGCACCAATAAATGGGGATGGAATTGGTGGTTGTGAGTTTGAGAGTCTCCAGTGCCTGGCAAGCCAGAATTTGGGGCTCAAGGATCTTCGTGCTTGCGGAGTTGGACATGCAGTGTCTAATGTCAATTCTTCTGCATTAAATAAAAGAAAAGGGGGATATCGTGGAGCAACAGCTGGTTGA 819 0.4689 MDDGELDFSNHEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPASGDEDQAATDDHDSAESAEKKSKKRPTGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSPNSNPPIPNLPGSYVMNPCSMQCDDRVYCLHPGADGKITEGAPINGDGIGGCEFESLQCLASQNLGLKDLRACGVGHAVSNVNSSALNKRKGGYRGATAG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00086 272 Gene3D - 79 156 - -
Gabi4141g00086 272 MobiDBLite consensus disorder prediction 72 112 - -
Gabi4141g00086 272 MobiDBLite consensus disorder prediction 11 25 - -
Gabi4141g00086 272 MobiDBLite consensus disorder prediction 1 27 - -
Gabi4141g00086 272 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 137 IPR004827 GO:0003700|GO:0006355
Gabi4141g00086 272 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 168 IPR031106 GO:0003700|GO:0006351
Gabi4141g00086 272 Pfam Basic region leucine zipper 90 145 IPR004827 GO:0003700|GO:0006355
Gabi4141g00086 272 SUPERFAMILY Leucine zipper domain 92 138 IPR046347 GO:0003700|GO:0006355
Gabi4141g00086 272 CDD bZIP 100 147 - -
Gabi4141g00086 272 Coils Coil 101 135 - -
Gabi4141g00086 272 SMART brlzneu 88 155 IPR004827 GO:0003700|GO:0006355
Gabi4141g00086 272 MobiDBLite consensus disorder prediction 76 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00086 Gabi-Chr4141 611615 614548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00086 1 271 bZIP Transcription Factor Family AT2G16770 61.905 1.20e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4141g00086 bZIP_2 1.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00086 K25785 - gmx:780549 433.335