Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00065 ATGCGGAGAGAGATCGCGTTTCTCGTTCAGCCGCGATGTCTCCTTCTCCTCCTTGTTCTCTCAATTTTCCTCATTTTCGCAATCTCTGGATCTAGACGGGTATGCCCTTTAACCCTTTATTCGTATACTGTTGTCATTGCTGAGGAGCAAACAGAAGAGGAACATGAAATTACGCACAGAGTATACTTGGATGTTGATATTGATAAACAGCGTTTAGGTAGGATTGTGATTGGATTGTATGGCCAAATTGTACCGAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGCGAGAGTGCAAGTAGCTTAAAACTTCATTACAAAGGAACACCATTTCATCGGATAATATCTGGTTTCGTGATTCAGGGTGGAGACATTGTTCATCATGATGGCAAAGGATCTGAATCTATTTATGGTGGCACCTTTCCTGACGAGAATTTCAAGATTAAACATTCTCACGCTGGCGTTGTCTCTATGGCAAATTCAGGACCTGATTCCAATGGCTCTCAGTTTTTCATTACTACGGTGAAAGCCAGCTGGTTGGATGGAGACCATGTTGTCTTTGGCAAGGTTGTTCAAGGCATGGATATTGTGTTTGCAATTGAAGGGGGAGCTGGAACCTACAGTGGAAAACCCAGAAAGAAAGTAGTGATTGCAGACTCTGGAGAGATACCTAAGAGCAGGTGGGATGAAGAAAGTTGA 711 0.4304 MRREIAFLVQPRCLLLLLVLSIFLIFAISGSRRVCPLTLYSYTVVIAEEQTEEEHEITHRVYLDVDIDKQRLGRIVIGLYGQIVPKTVENFRALCTGEKGESASSLKLHYKGTPFHRIISGFVIQGGDIVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKASWLDGDHVVFGKVVQGMDIVFAIEGGAGTYSGKPRKKVVIADSGEIPKSRWDEES 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00065 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 60 227 - -
Gabi4141g00065 236 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 62 226 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 65 224 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
Gabi4141g00065 236 Gene3D - 46 233 IPR029000 -
Gabi4141g00065 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Gabi4141g00065 236 FunFam Peptidyl-prolyl cis-trans isomerase 47 233 - -
Gabi4141g00065 236 SUPERFAMILY Cyclophilin-like 56 227 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00065 Gabi-Chr4141 429601 433020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00065 73 224 U-box Gene Family AT5G67530 44.444 5.40e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00065 - - gmx:100800775 384.415