Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00012 ATGGAGAGATTCTCTGTATTTGTTACTACCTCTGTGTTCTGTCTCCTTCTCCTGATGTCCCAACCTGCTTCATCAGAAGATGATTCCAAAGCACTTCTTGCGCTCAAATCCTCCATTGATGTTCTCAACAAGCTTCCATGGCGAGGAGGAAGCGATGTTTGCACATGGTTAGGAGTCAAAGATTGCTTCAACGGAAGGGTTAGAAAGCTAGTTCTCGAAAGCTCAAACTTAACCGGTGCTCTGGAATCGAAGATCTTGAACCGTTTGGATCAACTTCGAGTACTCAGCTTCAAAGGAAACTCACTCTCTGGTCAAATCCCTGACCTCTCTGCCTTGGTTAATCTCAAATCCATATACCTCAACGACAACAACTTCTCCGGCAAATTCCCCGCCTCTGTTTCCCTCCTTCATCGTGTCAAGGTCATCGTTTTATCCGGGAACAGAATCTCCGGCGACATTCCTCCGTCGGTGCTCAAGCTCCGGCGACTCTACATTCTCTACTTGCAAGACAACTTGTTCACGGGACCTATCCCCGGTTTCAATCAAACCGGCCTAAGGTACCTGAATGTCTCCAACAACCAACTCTCCGGCGAGATCCCGGTGACTCCGGCATTGATCCGATTCAATGCGTCGTCGTTTTCGGGAAACCCTGGGCTCTGCGGCGAACAGATCCACCGGACATGCAACTTGTTGCCGCCGCCGCCGTCGATAAGCCCAAGTTATCCCATGAAACAACCAGGAGGGAACACGACATCATCGAACCGCACGAAACTGATTAAGATAATTGGAGGGAGTGTCGGTGGGGTTGTTTTGGTTCTAATATGCTTGCTTCTTCTGCTGTTGGCGAATCGCAGGAACCGTAGGAAAAGGGTGGGTTCTGGATCGAGGACTAAATGCGGTGACGTGGCAGAAGAAGGGGAGGATCATGCAATAGCAATTGTGGAAGGAGGCGATGGCAGAGGCGGTAATAACGAGGGGAAACAAGGGGGTTTTGCATGGGAAAGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAACAGGGGATCGGGAGATGAGTTATGGTTTGGAGGATTTGCTGAAGGCTTCGGCTGAGACTTTGGGGAGGGGTATTATGGGAAGTACGTATAAGGCAGTGATGGAGTCAGGGTTCATAGTTACTGTGAAGAGATTAAAAGATGCAAGGTACCCTGGGTTGGATGAGTTTAGGGCACACATTGAGATCCTTGGGAGGCTTAGGCACCCTAACTTGGTCCCACTTAGGGCTTATTTCCAGGCTAAGGAGGAACGTCTTCTTGTTTATGATTACTTTCCAAATGGCAGCCTCTTTTCTCTAATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCGGAAGATCTAGCAACTGGCATGCTCTATATCCACCAGAACCCAGGCTTGACTCATGGAAACCTTAAATCTTCAAATGTGTTGTTGGGTTCTGACTTTGAATCCTGTCTTACTGATTATGGTCTCACTATGTTCCTTAATCCTGACTCATTGGAAGAGACAAGTGCCACTTCTTTATTCTATAGAGCACCTGAATGCCGCAGCTTTCATAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTACTTATCCTTGAACTTTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGGCACATGGCTCAGATATACCAAAGTGGGTTCGGTCAGTGCGTGAAGAAGAGACAGAGTCAGGGGATGATCCTTCCTCAGGAAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTACCGGAGAATAGGCCTACAATGAAGGAAGTTTTAAAAATGATAAGAGATGCAAGAGGGGAAGCTCATGTCTCATCTAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAGGCTTTCCAAGGGAAGAACACCTGAGCATATGA 1998 0.4745 MERFSVFVTTSVFCLLLLMSQPASSEDDSKALLALKSSIDVLNKLPWRGGSDVCTWLGVKDCFNGRVRKLVLESSNLTGALESKILNRLDQLRVLSFKGNSLSGQIPDLSALVNLKSIYLNDNNFSGKFPASVSLLHRVKVIVLSGNRISGDIPPSVLKLRRLYILYLQDNLFTGPIPGFNQTGLRYLNVSNNQLSGEIPVTPALIRFNASSFSGNPGLCGEQIHRTCNLLPPPPSISPSYPMKQPGGNTTSSNRTKLIKIIGGSVGGVVLVLICLLLLLLANRRNRRKRVGSGSRTKCGDVAEEGEDHAIAIVEGGDGRGGNNEGKQGGFAWESEGLGKLVFCGTGDREMSYGLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLDEFRAHIEILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGMLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSLEETSATSLFYRAPECRSFHRSQTQPADVYSFGVLILELLTGKTPFQDLVQAHGSDIPKWVRSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPTMKEVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQGFPREEHLSI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00012 665 Gene3D Ribonuclease Inhibitor 182 230 IPR032675 -
Gabi4141g00012 665 FunFam Nuclear pore complex protein NUP107 25 179 - -
Gabi4141g00012 665 MobiDBLite consensus disorder prediction 636 665 - -
Gabi4141g00012 665 Pfam Protein kinase domain 363 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4141g00012 665 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Gabi4141g00012 665 SUPERFAMILY Protein kinase-like (PK-like) 364 636 IPR011009 -
Gabi4141g00012 665 Gene3D Phosphorylase Kinase; domain 1 348 435 - -
Gabi4141g00012 665 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
Gabi4141g00012 665 ProSiteProfiles Protein kinase domain profile. 360 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4141g00012 665 SUPERFAMILY L domain-like 25 221 - -
Gabi4141g00012 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 634 IPR046959 -
Gabi4141g00012 665 Gene3D Transferase(Phosphotransferase) domain 1 436 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00012 Gabi-Chr4141 92477 97469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00012 12 665 Receptor kinase-like Gene Family AT1G60630 63.198 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi4141g00012 Pkinase 9.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00012 - - gmx:100809866 1009.98