Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00011 ATGAGGTTGTGTGTTGCAAGATGTCTGGCTGTGTTCTGTCTCCTTCTCCTGATGTCCCAACCTGCTTCATCAGAAGATGATTCCAAAGCACTTCTTGCGCTCAAATCCTCCATTGATGTTCTCAACAAGCTTCCATGGCGAGGAGGAAGCGATGTTTGCACATGGTTAGGAGTCAAAGATTGCTTCAACGGAAGGGTTAGAAAGCTAGTTCTCGAAAGCTCAAACTTAACCGGTGCTCTGGAATCGAAGATCTTGAACCGTTTGGATCAACTTCGAGTACTCAGCTTCAAAGGAAACTCACTCTCTGGTCAAATCCCTGACCTCTCTGCCTTGGTTAATCTCAAATCCATATACCTCAACGACAACAACTTCTCCGGCAAATTCCCCGCCTCTGTTTCCCTCCTTCATCGTGTCAAGGTCATCGTTTTATCCGGGAACAGAATCTCCGGCGACATTCCTCCGTCGGTGCTCAAGCTCCGGCGACTCTACATTCTCTACTTGCAAGACAACTTGTTCACGGGACCTATCCCCGGTTTCAATCAAACCGGCCTAAGGTACCTGAATGTCTCCAACAACCAACTCTCCGGCGAGATCCCGGTGACTCCGGCATTGATCCGATTCAATGCGTCGTCGTTTTCGGGAAACCCTGGGCTCTGCGGCGAACAGATCCACCGGACATGCAACTTGTTGCCGCCGCCGCCGTCGATAAGCCCAAGTTATCCCATGAAACAACCAGGAGGGAACACGACATCATCGAACCGCACGAAACTGATTAAGATAATTGGAGGGAGTGTCGGTGGGGTTGTTTTGGTTCTAATATGCTTGCTTCTTCTGCTGTTGGCGAATCGCAGGAACCGTAGGAAAAGGGTGGGTTCTGGATCGAGGACTAAATGCGGTGACGTGGCAGAAGAAGGGGAGGATCATGCAATAGCAATTGTGGAAGGAGGCGATGGCAGAGGCGGTAATAACGAGGGGAAACAAGGGGGTTTTGCATGGGAAAGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAACAGGGGATCGGGAGATGAGTTATGGTTTGGAGGATTTGCTGAAGGCTTCGGCTGAGACTTTGGGGAGGGGTATTATGGGAAGTACGTATAAGGCAGTGATGGAGTCAGGGTTCATAGTTACTGTGAAGAGATTAAAAGATGCAAGGTACCCTGGGTTGGATGAGTTTAGGGCACACATTGAGATCCTTGGGAGGCTTAGGCACCCTAACTTGGTCCCACTTAGGGCTTATTTCCAGGCTAAGGAGGAACGTCTTCTTGTTTATGATTACTTTCCAAATGGCAGCCTCTTTTCTCTAATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCGGAAGATCTAGCAACTGGCATGCTCTATATCCACCAGAACCCAGGCTTGACTCATGGAAACCTTAAATCTTCAAATGTGTTGTTGGGTTCTGACTTTGAATCCTGTCTTACTGATTATGGTCTCACTATGTTCCTTAATCCTGACTCATTGGAAGAGACAAGTGCCACTTCTTTATTCTATAGAGCACCTGAATGCCGCAGCTTTCATAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTACTTATCCTTGAACTTTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGGCACATGGCTCAGATATACCAAAGTGGGTTCGGTCAGTGCGTGAAGAAGAGACAGAGTCAGGGGATGATCCTTCCTCAGGAAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTACCGGAGAATAGGCCTACAATGAAGGAAGTTTTAAAAATGATAAGAGATGCAAGAGGGGAAGCTCATGTCTCATCTAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAGGCTTTCCAAGGGAAGAACACCTGAGCATATGA 1995 0.4762 MRLCVARCLAVFCLLLLMSQPASSEDDSKALLALKSSIDVLNKLPWRGGSDVCTWLGVKDCFNGRVRKLVLESSNLTGALESKILNRLDQLRVLSFKGNSLSGQIPDLSALVNLKSIYLNDNNFSGKFPASVSLLHRVKVIVLSGNRISGDIPPSVLKLRRLYILYLQDNLFTGPIPGFNQTGLRYLNVSNNQLSGEIPVTPALIRFNASSFSGNPGLCGEQIHRTCNLLPPPPSISPSYPMKQPGGNTTSSNRTKLIKIIGGSVGGVVLVLICLLLLLLANRRNRRKRVGSGSRTKCGDVAEEGEDHAIAIVEGGDGRGGNNEGKQGGFAWESEGLGKLVFCGTGDREMSYGLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLDEFRAHIEILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGMLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSLEETSATSLFYRAPECRSFHRSQTQPADVYSFGVLILELLTGKTPFQDLVQAHGSDIPKWVRSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPTMKEVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQGFPREEHLSI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00011 664 Gene3D Ribonuclease Inhibitor 181 229 IPR032675 -
Gabi4141g00011 664 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Gabi4141g00011 664 SUPERFAMILY L domain-like 24 220 - -
Gabi4141g00011 664 SUPERFAMILY Protein kinase-like (PK-like) 363 635 IPR011009 -
Gabi4141g00011 664 Pfam Leucine rich repeat N-terminal domain 25 58 IPR013210 -
Gabi4141g00011 664 ProSiteProfiles Protein kinase domain profile. 359 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4141g00011 664 MobiDBLite consensus disorder prediction 635 664 - -
Gabi4141g00011 664 Pfam Protein kinase domain 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4141g00011 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 633 IPR046959 -
Gabi4141g00011 664 Gene3D Phosphorylase Kinase; domain 1 347 434 - -
Gabi4141g00011 664 Gene3D Transferase(Phosphotransferase) domain 1 435 650 - -
Gabi4141g00011 664 FunFam Nuclear pore complex protein NUP107 24 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00011 Gabi-Chr4141 89094 97469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00011 8 664 Receptor kinase-like Gene Family AT1G60630 62.613 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi4141g00011 Pkinase 9.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00011 - - gmx:100809866 1005.36