Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00009 ATGGCGGCTACTGTATCTGCTTGGTCTAAACCGGGAGCATGGGCACTGGATTCCGAGGAACACGAAGAGGAACTCCTTCAACAGAAGAACCACATCGATGACACCAAGCCACTCGCCGACTTTCCTTCCCTCGCCGTCGCCGCTGCCACCAAGCCCAAGAAGAAGAAACCCCAGACCCTCTCTTTGGCTGAGTTCACCGCCAAACCCGTTGAGCCCGTGACCCATCAAGATCTCTACTCGCTGCCCACCGGTCCGCGCCAGCGAACTGCCGAGGAACTCGACCGCGATCGGAATCGACTCGGCGGTGGCTTCAAGTCCTACGGTGACCGGTCCAACAGGAATTCTGGCGGCGACGAGTCTTCCAATTCCAGATGGGGTTCATCTAGGGTTTCTGATGAGCCCAGGAGGAACGGTTCGTTTGGTTCTAGGGATAGGGATTCGAATCGCGAGATGGCACCCTCGCGAGCTGATGAAACTGATAATTGGGCTGCTGCGAAGAAATCGACCGTTGGGAACGGGTTTGAGAGGAGGGAAAGGGAAAGAGGGGTTTTTTTCGATTCACAGTCGCGAGCTGATGAATCTGATAGTTGGGTTTCCAATAAGAACTTTGTGCCATCGGAGGGAAGGAGATTTGTTTCCAATGGTGGTGGTGGTTTTGAAAGAGAGAGGAAGGTTGGGTTTGGTTCCAGCGGCGGTGCAGATTCTGATAACTGGAACAAGAAGAAGGGTGAATTCAACGGTGGCAGTGAAAGAGGTGAGACTGGTGGTGTAAGGCCTAGGCTTGTTTTGCAACCTCGGGCACTGTCGGTGAGTAATGAAAGCACAGAAGGAGTTGCTTCTGGGAATGTAGCAAAGCCTAAGGGCCCAAATCCATTCGGAGAGGCAAGGCCAAGGGAGCAGGTTTTGGCTGAGAAAGGGCAAGATTGGAAAAAGATTGATGAGCAGCTTGAGACCATGAAGATTAAGGAAACTGTTGATGGGTCTGGGAAGAGGGGTTTTGGTTCTGACAATGGACGTCCTAGTTTGCCAGAATATCGCACTGAGAGGAGTTGGAGGAAGGCAGAATCTGATGATGATCGCCCAAAAAGTGCTGAGAAAGTGGAGGAGGAACACGTTGATGAAAACTGA 1128 0.5222 MAATVSAWSKPGAWALDSEEHEEELLQQKNHIDDTKPLADFPSLAVAAATKPKKKKPQTLSLAEFTAKPVEPVTHQDLYSLPTGPRQRTAEELDRDRNRLGGGFKSYGDRSNRNSGGDESSNSRWGSSRVSDEPRRNGSFGSRDRDSNREMAPSRADETDNWAAAKKSTVGNGFERRERERGVFFDSQSRADESDSWVSNKNFVPSEGRRFVSNGGGGFERERKVGFGSSGGADSDNWNKKKGEFNGGSERGETGGVRPRLVLQPRALSVSNESTEGVASGNVAKPKGPNPFGEARPREQVLAEKGQDWKKIDEQLETMKIKETVDGSGKRGFGSDNGRPSLPEYRTERSWRKAESDDDRPKSAEKVEEEHVDEN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 342 375 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 1 37 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 171 188 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 136 162 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 15 36 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 189 207 - -
Gabi4141g00009 375 Pfam Plant specific eukaryotic initiation factor 4B 7 343 IPR010433 GO:0003743
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 108 135 - -
Gabi4141g00009 375 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 88 103 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 49 375 - -
Gabi4141g00009 375 MobiDBLite consensus disorder prediction 298 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00009 Gabi-Chr4141 69867 72300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00009 1 354 Eukaryotic Initiation Factors Gene Family AT4G38710 51.768 3.80e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00009 - - pvu:PHAVU_011G033300g 529.635