Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4141g00003 ATGTTTTCTGTCTCCTTAATCAACCCCTTATTCTTATCCAGTAATATCAAATCCTCCAATAGTAGAAAAAGTTCCTATCTTTCAAGAAAAATTGTTGCCATTCATACCACAGTTGAAAACAGAGGACCCTGTTCTTGTGCAACAAAGATGAGTTCCCTCTATGAGGTGCTTGGAATTTCAATGGGTGCAAGCTGCATCGAAATTAAGTCTGCTTATAGAAAGCTGGCAAGAACATGTCACCCTGATGTTGTAGCAATGAATCAGAAGGAAAGCTCAAGTAACCAGTTTATGATGATCCATTTAGCATACTCAACTTTGTCTGACCCAGATAAGCGTGCTCGATATGATAGAGAAATCTATGAACACAGAAGACCAGCTACTGTAACTTCCATGTCAGGAAGATATCGGACATATTCCCATGCCGGAAGGAAATGGGAAACGGATCAATGTTGGTAG 456 0.3991 MFSVSLINPLFLSSNIKSSNSRKSSYLSRKIVAIHTTVENRGPCSCATKMSSLYEVLGISMGASCIEIKSAYRKLARTCHPDVVAMNQKESSSNQFMMIHLAYSTLSDPDKRARYDREIYEHRRPATVTSMSGRYRTYSHAGRKWETDQCW 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4141g00003 151 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 16 144 - -
Gabi4141g00003 151 Pfam DnaJ domain 53 116 IPR001623 -
Gabi4141g00003 151 PRINTS DnaJ domain signature 54 72 IPR001623 -
Gabi4141g00003 151 PRINTS DnaJ domain signature 91 111 IPR001623 -
Gabi4141g00003 151 PRINTS DnaJ domain signature 72 87 IPR001623 -
Gabi4141g00003 151 SUPERFAMILY Chaperone J-domain 48 132 IPR036869 -
Gabi4141g00003 151 CDD DnaJ 54 108 IPR001623 -
Gabi4141g00003 151 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
Gabi4141g00003 151 Gene3D DnaJ domain 43 142 IPR036869 -
Gabi4141g00003 151 SMART dnaj_3 51 111 IPR001623 -
Gabi4141g00003 151 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4141g00003 Gabi-Chr4141 28778 29375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4141g00003 54 116 C2H2 Transcription Factor Family AT1G74250 46.269 2.79e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4141g00003 - - gmx:100305807 160.999