Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi413g00001 ATGGCATTCCTCCAAGTTGGATTCTATGAATCCACGTGCCCAAGTGCAGAGTCCACAGTGGAGAGTGTAGTGCAGAAGCGATTCGAACAAGACAAGTCCATAACAGCATCCTTACTTCGCATGCAATTCCATGATTGCTTTGTGAGAGGTTGTGATGCATCTATACTCATAGACTCCACTAAGAACAACACAGCAGAGAAAGACGCATCTCCGAACGCTAGCGTTCGAGGGTATGATCTGATTGATGAGGTCAAGAAAAGCCTCGAAGCTACACGTCCTTCAATTGTGTCATGTGCTGATATCATAACATTAGCAACCAGAGATGCTGTTGCTTTATCTGGAGGAGCCAAATACGTTGTTCCCACAGGAAGACGTGATGGATTAACCTCTACAAGTACTGAAGTTGATTTGCCCGGACCCTCCACTCCTGTGCCAATAGCATCACAAATATTTGCAAAAAAAGGCATAACAACAGAAGAAATGGTGACCCTTTTGGGTGCACATACAGTTATACATCATTTTGATGTATTGAGGGGTTCTGCTCTATAA 549 0.439 MAFLQVGFYESTCPSAESTVESVVQKRFEQDKSITASLLRMQFHDCFVRGCDASILIDSTKNNTAEKDASPNASVRGYDLIDEVKKSLEATRPSIVSCADIITLATRDAVALSGGAKYVVPTGRRDGLTSTSTEVDLPGPSTPVPIASQIFAKKGITTEEMVTLLGAHTVIHHFDVLRGSAL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi413g00001 182 FunFam Peroxidase 7 140 - -
Gabi413g00001 182 ProSitePatterns Peroxidases proximal heme-ligand signature. 160 170 IPR019793 -
Gabi413g00001 182 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Haem peroxidase superfamily signature 35 49 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Haem peroxidase superfamily signature 160 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 ProSiteProfiles Plant heme peroxidase family profile. 3 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 SUPERFAMILY Heme-dependent peroxidases 4 170 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 Gene3D Peroxidase, domain 2 138 170 - -
Gabi413g00001 182 ProSitePatterns Peroxidases active site signature. 35 46 IPR019794 GO:0004601
Gabi413g00001 182 PRINTS Plant peroxidase signature 76 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Plant peroxidase signature 37 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Plant peroxidase signature 159 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Plant peroxidase signature 95 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Plant peroxidase signature 13 32 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 Gene3D - 7 137 - -
Gabi413g00001 182 PANTHER PEROXIDASE 25-RELATED 4 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi413g00001 182 Pfam Peroxidase 20 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi413g00001 Gabi-Chr413 10431 12462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi413g00001 1 170 Peroxidase AT4G26010 61.404 6.67e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi413g00001 K00430 - gmx:100777946 250.751