LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4134g00043	ATGGAGACCCAAAAGCTTATACCTTTAATCCTTCTCCTTTTCATACCCTTCTCAGTTTCCTTCACTCCCACAGATAACTACCTTCTTAGCTGTGGATCACACACCAATGCTTCCCTCTTCAACCGAGTCTTCATGGGTGATTCCACTTTTCTCTCTTCAGATGAGTCCATTTCTCTCACAAATCAAAACCCACCTCCAAATTTGCCCACTTTGTACCACACAGCCAGAGTTTTCAACATCCCTGCGGGATACAGGTTCAACATGAATAAAAACGGTACCCACTTGGTGCGTTTTCATTTCTCCCCCTTTAAAGCTCAAAATTTTGATCTGAAATCTGCAAAATTTAGTGTCTTGGTTAATGGGATTTCGGTTCTGAGCGATTTCCAGCCACCTAATGATGTGCTGCTTAAAGAGTTTATTTTGAAGATAGAATCAAATTTTCTTGAAATTTTGTTTAGACCTGTTGGTAACTCAGGTTTTGGCTTTGTCAATGCTGTGGAAGTGTTTGATGCTCCTGCAGATTTTGTTACAGATTATGGAGTCAGGTTGGTTGGTCCTTCTGGAGTGGAGGAGTACAAAAACCTTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGAAAATAACTCCTTTCAATGACACTCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTGGTCTTTAAGGATGCAGCTAAGCCTGCTGTAAGCACTCATACACCAAATTATCAGACGGGAGGTGCAACTCCAGAGATTGCGCCTGATAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAACTTTGGCTTCAAGATTCAACATAACCTGGAATTTTCCTGTGGCTCCTTCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTGAACTTCCTATACTTTGATGTGTATATCAATGGGTACACTGCATATAAGGATCTTGATTTGTCAACCCTTACTGTCCACACGCTTGCATCACCAGTCTATGTGGATTTTGTTGCAAATTCAGATGGTTCAGGTGTTACTCAATTAAGTGTTTGTCCTTCTGATCTAAGCAGTTCTATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAATGTTGTCGATTCTAGTATTGTGCACAAAAAGAAAAAGTTGAGGGTGTTGGTTGGTTCAATTGTTGGAGGAATTGTTGTCTTATTTTTAGTTATATGTGCTTTTCTAATTGCTACCAAATGCAGGAAGAAGAAACCAAATCATAGGACAGTGGAAAGTGTTGGATGGACACCTTTACGTTTGTTTGGAGGGAGTTCCCTTAGTAGATCATCTGAACCTGGTTCTCATGGATATTTTGGCATGAAGATCCCTTTTGCTGATATACAATCAGCAACGAACAACTTTGATAGGAGTCTGATTATAGGGTCTGGTGGATTTGGTATGGTTTACAAGGGAGTACTCAGAGACAATGTGAAGGTTGCAGTCAAGAGAGGCATGCCTGGGTCCAGACAAGGCCTTCCAGAATTCCAGAGTGAAATAACAGTTTTAACTAAAATTCGCCATCGCCACCTTGTTTCACTAGTTGGTTTTTGTGAAGAAAATTCAGAAATGATACTTGTCTACGAGTATGTGGAAAAAGGTCCACTGAAAAAACATTTATATGGTTCAGCAGGACTACCACCTCTCTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCGGCTAGAGGTCTCCACTATCTTCATACTGGTTTTGCTCAAGGAATCATCCACCGCGACATTAAATCAACCAATATATTGCTTGATGAAAACTATGTGGCTAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGGCCATGTATCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTTCCGGAGGCAGCAGCTTACAGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGCAGAGCTGCTGTTGATCCACAACTGGCCAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCTGCAGCAAGGCATGCTGGAGCATATTGTTGACCCCCATCTTGTTGGACAGATCAAACAAAGCTCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGACAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAATATGCACTTCAGCTCCAGGAAAGTGGACAACCAAGGGAGCCACATGCCCATGGCAGTGCTAGTGAATCAGTAAATGTGACAACTACAATTATTCCTGGAAATCCTGCTACCAACAGAAGAAGAGAGAGAGATTATGATAATGCTTGTTCAGACATAAGTACTAGCCAAGTGTTTTCCCAGCTAATGACCAATGAAGGCAGATAG	2457	0.4119	METQKLIPLILLLFIPFSVSFTPTDNYLLSCGSHTNASLFNRVFMGDSTFLSSDESISLTNQNPPPNLPTLYHTARVFNIPAGYRFNMNKNGTHLVRFHFSPFKAQNFDLKSAKFSVLVNGISVLSDFQPPNDVLLKEFILKIESNFLEILFRPVGNSGFGFVNAVEVFDAPADFVTDYGVRLVGPSGVEEYKNLSSQVLETIHRINVGGMKITPFNDTLWRTWIPDEDYLVFKDAAKPAVSTHTPNYQTGGATPEIAPDNVYMTAQQMNRENSTLASRFNITWNFPVAPSGGVPHLVRLHFCDIVSPALNFLYFDVYINGYTAYKDLDLSTLTVHTLASPVYVDFVANSDGSGVTQLSVCPSDLSSSIRMNAILNGAEIMKMVNVVDSSIVHKKKKLRVLVGSIVGGIVVLFLVICAFLIATKCRKKKPNHRTVESVGWTPLRLFGGSSLSRSSEPGSHGYFGMKIPFADIQSATNNFDRSLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFQSEITVLTKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSAGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCGRAAVDPQLAREQVNLAEWALEWLQQGMLEHIVDPHLVGQIKQSSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESGQPREPHAHGSASESVNVTTTIIPGNPATNRRRERDYDNACSDISTSQVFSQLMTNEGR	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4134g00043	818	Gene3D	Transferase(Phosphotransferase) domain 1	555	771	-	-
	Gabi4134g00043	818	CDD	STKc_IRAK	485	751	-	-
	Gabi4134g00043	818	MobiDBLite	consensus disorder prediction	771	786	-	-
	Gabi4134g00043	818	SUPERFAMILY	Protein kinase-like (PK-like)	455	751	IPR011009	-
	Gabi4134g00043	818	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	600	612	IPR008271	GO:0004672\|GO:0006468
	Gabi4134g00043	818	ProSiteProfiles	Protein kinase domain profile.	479	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi4134g00043	818	ProSitePatterns	Protein kinases ATP-binding region signature.	485	507	IPR017441	GO:0005524
	Gabi4134g00043	818	Pfam	Malectin-like domain	29	383	IPR024788	-
	Gabi4134g00043	818	MobiDBLite	consensus disorder prediction	759	798	-	-
	Gabi4134g00043	818	SMART	serkin_6	479	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi4134g00043	818	FunFam	Putative receptor-like protein kinase	26	172	-	-
	Gabi4134g00043	818	FunFam	Receptor-like protein kinase FERONIA	199	385	-	-
	Gabi4134g00043	818	FunFam	Receptor-like protein kinase FERONIA	555	771	-	-
	Gabi4134g00043	818	FunFam	receptor-like protein kinase FERONIA	448	554	-	-
	Gabi4134g00043	818	Pfam	Protein tyrosine and serine/threonine kinase	484	690	IPR001245	GO:0004672\|GO:0006468
	Gabi4134g00043	818	PANTHER	OS07G0166700 PROTEIN	466	757	IPR045272	GO:0004714\|GO:0006468
	Gabi4134g00043	818	Gene3D	-	199	385	-	-
	Gabi4134g00043	818	Gene3D	-	26	173	-	-
	Gabi4134g00043	818	Gene3D	Phosphorylase Kinase; domain 1	453	554	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4134g00043	Gabi-Chr4134	696585	699130	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4134g00043	2	818	Receptor kinase-like Gene Family	AT3G46290	48.353	0.0	734

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Gabi4134g00043		Malectin_like	1.5e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi4134g00043	-		-	gmx:100797031	1372.45